Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00575 ATGGGGATCGATCTAAAGGCAGGAGGTAAGAGCAAAAAGTCGAAGAGAACAGCACCTAAGTCCAATGATATCTATCTCAAGCTCTTGGTCAAGCTCTATCGGTTCCTTGTTCGGAGAACTGGCAGCAATTTCAATGCTGTTATTCTCAAGAGGTTGTTCATGAGCAAGGTTAACAAGCCTCCACTATCTTTGTCAAGGTTGATCAAGTACACAAAGGGGAAGGAAGGTAAGATTGCTGTGGTGGTGGGAGCCATAACTGACGATATCCGTGTTTATGAAGTTCCAGCCATAAAGGTTACAGCACTCAGGTTTACAGAGACCGCTAGGGCAAGAATCGAAAAGGCTGGCGGTGAATGCTTGACTTTTGATCAGTTGGCTCTCAGGGCCCCTCTTGGACAGAACACTGTTCTTCTTAGAGGCCCAAAGAATGCCCGTGAAGCTGTGAAGCACTTTGGTCCTGCTCCTGGTGTGCCACACAGCCACACAAAGCCTTATGTTAGAGCCAAGGGAAGGAAGTTCGAGAAGGCCAGAGGAAAGAGGAACAGCAGAGGATTCAGAGTTTGA 564 0.4752 MGIDLKAGGKSKKSKRTAPKSNDIYLKLLVKLYRFLVRRTGSNFNAVILKRLFMSKVNKPPLSLSRLIKYTKGKEGKIAVVVGAITDDIRVYEVPAIKVTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRAKGRKFEKARGKRNSRGFRV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00575 187 PANTHER 60S RIBOSOMAL PROTEIN L18 1 186 IPR000039 GO:0003735|GO:0005840|GO:0006412
Car04g00575 187 SUPERFAMILY Ribosomal proteins L15p and L18e 20 139 IPR036227 -
Car04g00575 187 Gene3D - 1 187 - -
Car04g00575 187 Pfam Ribosomal protein 60S L18 and 50S L18e 2 187 IPR021131 -
Car04g00575 187 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00575 Car-Chr4 5762821 5764866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00575 3 187 Cytoplasmic Ribosomal Protein Gene Family AT2G47570 77.419 1.08e-103 294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02950 03 74715093 74717456 Car04g00575 04 5762821 5764866 PCT