Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00572 ATGGGTCGAGGAGATGCAGCTGGTTCCAAGGGGAAGAAGAAGGGATTGACAACATTTACCATTGACTGCGCCAAGCCCGTGGAGGACAAGATCATGGACATTGCCTCTCTCGAAAAGTTCCTTCAAGAGAGGATTAAGGTTGGTGGTAAACCTGGTGCTCTTGGCGACGCCGTCACTGTTTCACGTGAAAAGAGCAAAATCACCGTTACTTCTGACAGCAACTTCTCCAAACGGTATCTCAAGTACTTGACCAAAAAGTACTTGAAGAAACACAATGTACGGGACTGGCTTAGAGTGATTTCTTCTAACAAAGATAGAAGTGTTTATGAACTGAGGTACTTCAACATTGCCGAGAATGAAGGAGAGGAAGAAGATTAA 378 0.4471 MGRGDAAGSKGKKKGLTTFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKPGALGDAVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVISSNKDRSVYELRYFNIAENEGEEED 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00572 125 Gene3D - 6 125 IPR038526 -
Car04g00572 125 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 125 - -
Car04g00572 125 PANTHER 60S RIBOSOMAL PROTEIN L22 1 125 IPR002671 GO:0003735|GO:0005840|GO:0006412
Car04g00572 125 Pfam Ribosomal L22e protein family 17 123 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00572 Car-Chr4 5744148 5746018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00572 1 125 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 83.200 1.26e-63 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00572 K02891 - pop:7475906 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02953 03 74748948 74750479 Car04g00572 04 5744148 5746018 PCT