Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00562 ATGAGTTGTGGTTTTCTTACAATGATCTTTATCATTATCATCACACTCTTGATTCCTCTATCATCATCACAAAGAACTCACATTTTGAATGTTGGTGGTTTCATCAATGCAGCTAGAAGCTTCCATGTTCAAAGCTTACAAGACATGTATTTCATGAAGGAGAATAATGAACAACAAGAAAATGAAAACCAAGTTGAGAAAATCTCAGGATTAGATGAGAATGAAGTGAAACAAGGTTTTATTGTTGAAAAGTTTAGATCTTTACTTGGATTAAGAAGTTTCCACAAAAGGGTATCTTCAAATCTTGATTCTTCTGAGTTTCTCACACCATCACCTTCTCCGTCACCAAATATTGAAGCTGAATCTCCTTCTCCAGCACCTTCACCAGTAATGCATTTGCATCCTCATTTTCATCATCAAAGACATCATTTTTATTGGAAGCAAACACCTAAAAAGCTTCATCATGATGATGATAGAGGCAGGGTTAAAAGAATACTAGTAGCTGTTTTTGTGTCATTAGGAGTTGCTGCATTTTTTGGTGCTTTTGGCTTAATCTTATTCTGCAGGAAACTCACAAATCACAAAAAGAAACCAAAAAGGACAATGCCACTTTGCAACAATACAAAAGGTGGTTTTCAAAATTCATCAAACAATAATAAGGTTAGTTCAAATCAACGATTAGATCTGTTTTATCTTGAATCTTTAGGTGAAGATATTGAACAACATGGCTGTACTTTGAAAAAGACTAGTAGTGAGAATAATGGTTTAGATTATGATAATATTGTTATAAATTCTTCCACTAAGGAAATTGTGTCGGTTCATGAAGAAGTTGAATTAGTAAaacatgaaaatgaagataaaattgttgatgaagatTGTTGTAATTCATCAGATGATGAAAGTTTTCATTCATTTGTTGATTCACAATCAAATACAAGACTTTCTAATGGTAGCCTTAGTGACACACACACTTTGTCACCTCAAGATTCATTTTCATTATTACCAAAAGACCAATTTCCTAATTCTCCTCAAAACTTAATCTCAAACACACATTCTCAACAAAAACATGAAGACCAAGAGATTGAAGAAACCTTTGACCAATGTCCAAAAACATCTTCTTcaccaccacttcctcctacaccccctccaccaccaccgacacccccCTTGCAAATGCCACTATTTTCTTTACATTCTCTAACATCATCATCTAGAGTTTCATCTCACTCTCCACTTTCATTAACATCTTCTCATACCTTATCATCTCCTATAAATTCAGAAACTTTTTCAGGATCAAATCATCAAAGTCCTGAAAAAGATTCATTTTCTCCATCTACACCTAACCAAACAAAATCTCCTCTTACCAACAAAATTCCACCACCACCATGCCCTCCTCCTCCATTTCCAAAAGGTGCCAAAACACCACCTCCTCCACCGTCTCAATTCCCTCAATTTACACCACTTGGTAAAGATGGTTCACCACTTCCAAAACTCAAACCACTTCATTGGGACAAAGTAAGAGCAGCACCAAATAGGACAATGGTTTGGGACAAACTAAGATCAAGCTCATTTGAGTTTGATGAGGAAATGATTGAGTCACTTTTTGGGTACAATTTACAAAATTCAATGAAAAATGAGGAAAGTAAGAGTAAAACTCCATCTCCAAGCAAGCATGTACTTGAGCCAAAAAGGTTGCAGAACATAACAATACTATCAAAAGCTCTGAATGCGACAGCTGAACAAGTATGTGATGCATTAATGCAAGGGAAGGGATTGTGTTTGCAACAATTAGAGGCATTGGTGAAAATGGTACCTACCAAAGAAGAAGAGGCTAAGCTATTCAATTATAAAGGTGACATCAATGAATTGGGGTCCGCCGAAAAGTTTGTGAGGGAAGTGCTTAGTGTACCATTTGCTTTTCAACGAGTTCAAACCATGCTTTTCAAAGAGACTTTTGATGATGAAGTTGTTCACCTAAAGAACTCATTTTCAATGCTAGAGGAGGCATGCAAGGAGCTAAGATCAAGCAGACTCTTCTTAAAACTTCTAGAAGCAGTACTCAAAACAGGAAACAGAATGAACGTTGGAACAATAAGGGGAGGTGCAAGAGCATTTAAGCTCGACGCGCTTCTCAAGCTAGCAGATGTTAAAGGAACCGATGGAAAAACCAATTTACTCCACTTTGTCGTTCAAGAAATTGTTCGTTCAGAAGGAATCAGAGTTTCAGACAGCATAATGGgaaaaataagcacaaaaagcaacaacagaaacagaacagaagaagagaaagaagaagaTTACAGAAAAATGGGACTGGAATTAGTGTCTGGTCTCAGCACTGAATTATACAATGTTAAAAAGACAGCAACGATTGACTTAGATGTTCTTGCTAGTTCCGTTTCGAATCTAAAAGAAGGAATGGTTAGGCTGCAACATTTGGTGGAAAAAGAGTTGCTTGAGGATGAAGTAAGCTATAATTTTGTGGTGAATATGAAGATGTTTTTGCAATATGGTGAAGGAAATTTGAAGGAGTTGGAAGGTGATGAAGATAGAGTTTTGACACGTGTTAAGGAAATAACAGAGTATTTTCATGGTGATGTTAGTAAAGAGGATAATCCATTAAGAATATTTGTGATAGTGAGAGATTTTATGGGAATGTTGGATAATGTTTGTAAAGAGCTTAGAAGGTCTAAAACTACACGTGCACCAAACCCTCTTGCTCCTTTCAGATAG 2733 0.3425 MSCGFLTMIFIIIITLLIPLSSSQRTHILNVGGFINAARSFHVQSLQDMYFMKENNEQQENENQVEKISGLDENEVKQGFIVEKFRSLLGLRSFHKRVSSNLDSSEFLTPSPSPSPNIEAESPSPAPSPVMHLHPHFHHQRHHFYWKQTPKKLHHDDDRGRVKRILVAVFVSLGVAAFFGAFGLILFCRKLTNHKKKPKRTMPLCNNTKGGFQNSSNNNKVSSNQRLDLFYLESLGEDIEQHGCTLKKTSSENNGLDYDNIVINSSTKEIVSVHEEVELVKHENEDKIVDEDCCNSSDDESFHSFVDSQSNTRLSNGSLSDTHTLSPQDSFSLLPKDQFPNSPQNLISNTHSQQKHEDQEIEETFDQCPKTSSSPPLPPTPPPPPPTPPLQMPLFSLHSLTSSSRVSSHSPLSLTSSHTLSSPINSETFSGSNHQSPEKDSFSPSTPNQTKSPLTNKIPPPPCPPPPFPKGAKTPPPPPSQFPQFTPLGKDGSPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFEFDEEMIESLFGYNLQNSMKNEESKSKTPSPSKHVLEPKRLQNITILSKALNATAEQVCDALMQGKGLCLQQLEALVKMVPTKEEEAKLFNYKGDINELGSAEKFVREVLSVPFAFQRVQTMLFKETFDDEVVHLKNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTNLLHFVVQEIVRSEGIRVSDSIMGKISTKSNNRNRTEEEKEEDYRKMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLKEGMVRLQHLVEKELLEDEVSYNFVVNMKMFLQYGEGNLKELEGDEDRVLTRVKEITEYFHGDVSKEDNPLRIFVIVRDFMGMLDNVCKELRRSKTTRAPNPLAPFR 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00562 910 ProSiteProfiles Formin homology-2 (FH2) domain profile. 488 910 IPR015425 -
Car04g00562 910 MobiDBLite consensus disorder prediction 103 133 - -
Car04g00562 910 Pfam Formin Homology 2 Domain 492 887 IPR015425 -
Car04g00562 910 PANTHER FORMIN-LIKE PROTEIN 379 910 - -
Car04g00562 910 PANTHER FORMIN-LIKE PROTEIN 51 393 - -
Car04g00562 910 SUPERFAMILY Formin homology 2 domain (FH2 domain) 501 899 - -
Car04g00562 910 MobiDBLite consensus disorder prediction 372 392 - -
Car04g00562 910 SMART it6_source 488 902 IPR015425 -
Car04g00562 910 MobiDBLite consensus disorder prediction 394 453 - -
Car04g00562 910 MobiDBLite consensus disorder prediction 198 218 - -
Car04g00562 910 MobiDBLite consensus disorder prediction 291 499 - -
Car04g00562 910 MobiDBLite consensus disorder prediction 299 352 - -
Car04g00562 910 MobiDBLite consensus disorder prediction 454 484 - -
Car04g00562 910 PANTHER FORMIN-RELATED 51 393 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car04g00562 910 PANTHER FORMIN-RELATED 379 910 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car04g00562 910 Gene3D Formin, FH2 domain 511 904 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00562 Car-Chr4 5626767 5630982 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00562 418 910 FH2 protein (formin) Gene Family AT3G05470 68.663 0.0 670