Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00552 ATGGCTGATTTTATGACCTCTACCCACCGAGCCAAGTGGATCTTCTCTCCTCAAAAACTGGTTGAGAAATATGAAGCTGCTAATCAGAGAGCCAGACAAACCCTAGAGAAGTGTGGAGCAACTCTAATGGAAGTAGATGTTGACGGGTCTTTATCATATCCTGAACCCCAGACGACTGCAAACGATAGTGCTGAAAAGCATTCTCGGATAAAACCTCTTAGTATTGAAGAAGAACAATGTATTAAAGTATTTTATGAAAACAAGCTACAAGAAGTGTGTAAAAATTTTCACTTCCCTCATAAGATCCAGGCAACAGCCCTCATATTTTTTAAAAGATTCTATCTGCAATGGTCGGTGATGGAACATCAACCAAAAAATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAATCATGTTTCAGCTGAGGAGCTCGGCAAGGGGATTTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATAGTTTATGCTCCATATCGCTCAGTTGTTGGCTTTACAGATTATATGAAGGAATTTTGCAATGCTGGTGAGGACGAGCTTCAAACACTCAAGGCTTTGCAAAATACAGCAACACTGGAAATTGATAAAATGATGCTTACAGATGGACCACTCTTATTTCCTCCTGGGCAGATGGCCTTGGCCGGTCTGCGCACCTCAAATGCCCTCCATAACGTTGTTGACTTTGATAGTTTTCTGAGCAGAATTTTGTCCCATCAGAATTCCATGCATACAATGGCTGAGCTTCAGGAATCATtagatgcaattgattcttggGTTAGAAAATACAGAAGTCCTTCTGAGAAGGAATTGAAGCATATCAACCGGAAACTGAAGTCTTGTTGGGGTCTTAGCTCTCATGACGAGGGAAAGAAGAGGGAGAAGAAATCAAAGCACAAGTCCAAAAAGAGCTCAAATGAAGCACAAAACACATAG 996 0.3936 MADFMTSTHRAKWIFSPQKLVEKYEAANQRARQTLEKCGATLMEVDVDGSLSYPEPQTTANDSAEKHSRIKPLSIEEEQCIKVFYENKLQEVCKNFHFPHKIQATALIFFKRFYLQWSVMEHQPKNIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVVGFTDYMKEFCNAGEDELQTLKALQNTATLEIDKMMLTDGPLLFPPGQMALAGLRTSNALHNVVDFDSFLSRILSHQNSMHTMAELQESLDAIDSWVRKYRSPSEKELKHINRKLKSCWGLSSHDEGKKREKKSKHKSKKSSNEAQNT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00552 331 CDD CYCLIN 89 167 IPR013763 -
Car04g00552 331 Coils Coil 21 41 - -
Car04g00552 331 SMART cyclin_7 87 168 IPR013763 -
Car04g00552 331 PANTHER CYCLIN 1 330 IPR043198 GO:0006357|GO:0016538
Car04g00552 331 Pfam Cyclin, N-terminal domain 89 174 IPR006671 -
Car04g00552 331 Gene3D - 63 175 - -
Car04g00552 331 PANTHER CYCLIN-H 1 330 - -
Car04g00552 331 SUPERFAMILY Cyclin-like 179 304 IPR036915 -
Car04g00552 331 MobiDBLite consensus disorder prediction 304 331 - -
Car04g00552 331 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Car04g00552 331 Gene3D - 177 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00552 Car-Chr4 5540892 5545869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00552 1 280 Core Cell Cycle Gene Families AT5G27620 63.929 1.07e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00552 K06634 - gmx:547736 567