Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00551 ATGTTTGGTTCAGTGGGTCATGGAAGTGGTGGAGTACCTGAACCCTCTTTGATCCCTCAACTCTTTGTTTGGCCTTATGGAGGAACAACAGTCTTTCTATCTGGTTCTTTCACTAGATGGTCGACAGTTATACCTATGTCTCCAATGGAATGCTGCCCGACTGCATTTCAAGTTACTTGGAACTTAACGCCGGGGTTTCATCAGTACAAATTCAATGTGGATGGTGAATGGCGGCATGATGAGCAGCAGCCATTTATAAATGTGAGCGTTGGGACAGTGAATACTATTTTTGTGACACAGCCCTCTATTTTACCTTCCAACTTCAATGCTGGATCACTTTGTAACCAAAAAACTGCTGGAACGCCTACTAGATCCTACATGGAGCTTGAGCAAAATGTCCCTGGGCACGTGGAAGCTTTTCCAGGGAAGTTGGAGTCTGATCTGCATGTCTCTCGCTACCATCTATCTACATTCATGTCATCAACAACTGCTTATGAGTTGCTTCCCAAGTCTGGCAAGGTTATTGCCTTGGATATAGATTTATCAGTTAAGCAAGCATTCCATATTCTTTATGAACAGGGAGTATCTATGGCTCCTGTTTGGGATTCTAGCAAGGGCAAGTTTGTTGGAGTGCTCAGTGCAATGGACATTATTCAAATAATAAAAGAGCTCGGGAGTCATGGATTCACTTTGACTGAAGAACAACTTGAGGCACATACTATAGCAGCATGGAGTGAGGAAAAATTACAGCAATGTGGAACTGATAGAAATGTGAGAACATATCCTTGGAATTTTGTTGATGCTGATCCCTATGAGAGTCTAAAAGACATTGCTTTAAAACTTTTGCAAAACAAGGTGCCAGCAGTTCCTATCGCACATCCCGAAGATGGTTCAGATCCTCAGCTGTTACACCTGACTTCTCTCTCAGAAATACTAAAACGTATATGCAGGTATTTCAAGAACTCTTCTAGTTCTTTGCCCATTCTTCAACTACCAATTGATTCAATACCTTTGGGTACGTGGGCGCCAAAAGTGGGGGAATACAATAAACTGTCACTTGCAATGCTAAGGCCAAATGCTTCTGTTAGTACTGCTCTTTCTCTAATGATTCAAGCTGAAGTTAGCTCAATACCAATTGTGAATGATAATGATTCATTACTTGGTATATATTCAAGAAGTGATATTACTGCATTGGCTAAAGATGACTTGTATGCTAGGATAAATCTTGATAAATTTAGTATCTCCCAGGCATTATTTTTGAGAGAAAATGTAAAATTACCTTACAGACAGAATGGGCAGAGATTTCTTATGTGTTTGAGGTCCCATAAATTGCACGTGGTCATGGAACGTTTGGCTAATTCTGATATAGAAGAAGTTGTGGTCGTGGAGCCTGGAAGTAGGCACGTGGAAGGGATCATTTCAATTGTTGACGTGTTTAGATTCTTATTGGGTAATTATGCATGA 1464 0.4071 MFGSVGHGSGGVPEPSLIPQLFVWPYGGTTVFLSGSFTRWSTVIPMSPMECCPTAFQVTWNLTPGFHQYKFNVDGEWRHDEQQPFINVSVGTVNTIFVTQPSILPSNFNAGSLCNQKTAGTPTRSYMELEQNVPGHVEAFPGKLESDLHVSRYHLSTFMSSTTAYELLPKSGKVIALDIDLSVKQAFHILYEQGVSMAPVWDSSKGKFVGVLSAMDIIQIIKELGSHGFTLTEEQLEAHTIAAWSEEKLQQCGTDRNVRTYPWNFVDADPYESLKDIALKLLQNKVPAVPIAHPEDGSDPQLLHLTSLSEILKRICRYFKNSSSSLPILQLPIDSIPLGTWAPKVGEYNKLSLAMLRPNASVSTALSLMIQAEVSSIPIVNDNDSLLGIYSRSDITALAKDDLYARINLDKFSISQALFLRENVKLPYRQNGQRFLMCLRSHKLHVVMERLANSDIEEVVVVEPGSRHVEGIISIVDVFRFLLGNYA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00551 487 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 10 484 - -
Car04g00551 487 SUPERFAMILY CBS-domain pair 345 485 IPR046342 -
Car04g00551 487 SMART cbs_1 173 222 IPR000644 -
Car04g00551 487 SMART cbs_1 434 483 IPR000644 -
Car04g00551 487 SMART cbs_1 352 400 IPR000644 -
Car04g00551 487 ProSiteProfiles CBS domain profile. 167 231 IPR000644 -
Car04g00551 487 Pfam Glycogen recognition site of AMP-activated protein kinase 18 99 IPR032640 -
Car04g00551 487 PANTHER CBS DOMAIN, IMMUNOGLOBULIN E-SET-RELATED 10 484 - -
Car04g00551 487 SUPERFAMILY E set domains 17 98 IPR014756 -
Car04g00551 487 SUPERFAMILY CBS-domain pair 155 320 IPR046342 -
Car04g00551 487 Gene3D - 144 326 IPR046342 -
Car04g00551 487 Gene3D Immunoglobulins 18 105 IPR013783 -
Car04g00551 487 Pfam CBS domain 173 222 IPR000644 -
Car04g00551 487 Pfam CBS domain 352 396 IPR000644 -
Car04g00551 487 Gene3D - 332 487 IPR046342 -
Car04g00551 487 CDD E_set_AMPKbeta_like_N 22 98 - -
Car04g00551 487 ProSiteProfiles CBS domain profile. 348 406 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00551 Car-Chr4 5520346 5531583 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00551 - - gmx:100790062 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02970 03 74877151 74883013 Car04g00551 04 5520346 5531583 PCT