Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00547 ATGGAATTGAACGATCAAAGCACTCAAATTCAAATCCTCGCTGAAAAGTTTCACCGTTTTGTTCTCGATTGCGAACTCAAGCAATCCCCAAACGCTCGCCCTTCAGATGATAATAACGAAGCAAAGAAAATAAATGAAAACACCGATTCCATGGATGAAAACAGTATATCCAATGGAGGAATCCATGAGAATTCTCCAGATCCGGGTCACACCCTTCCGATTTTGAAGAAAATCCTTGATCTCAGTACCAAAATTCAGGATTTGAAGAAGCAACACGTTGCCTTATCTGATCATGTGAAACTCACAACTGATTCTTTTCCTAGCCTTGATGTTTTGAACTCTATTCAGCTTCTAGGTTCTGAATACGAACTCTTGAAAAAAAAGTACCTCCAGGAATCCTCTGAGCGCAGACGGCTTTACAATGAAGTTATTGAACTCAAGGGTAATATTAGGGTTTTCTGCAGATGCAGGCCTTTAAGTGAAAGTGAAACTGCAAATGGGTTTGCATCTGTTGTCAATTTTGAATCATCTTCTGAAAATGAGCTTCAAGTCGTTTGCTCAGATTCTTCCAAGAAGCAGTTTAAATTTGATCATGTATTTAGGCCTGGAGATAACCAAGaggctgttttttctcaaactaaacctattgctacttcagtattggatggttttaatgtctgcatatttgcctacgggcaaactggaaccggtaaaacatttacaatggAGGGAACGCCGGAAGAGAGAGGAGTTAACTATAGAACGCTGGAAGAATTATTTAGGATATCTGAAGAGAGAAAGGGTGTAATGAAGTATGAGTTGCATGTTAGCATGTTGGAGGTTTATAATGAGAAGATAAGAGATCTTCTAGTGGAAAATTCTGCCCAACCTACTAAGAAATTGGAGATAAAGCAAGCTGCAGAAGGAACACAAGAAGTCCCAGGACTTGTTGAAGCTTGTGTTCATGGAACAGAAGATGTGTGGGAATTGCTCAAGACTGGAAACAGAGTCAGATCTGTTGGATCCACATCTGCTAATGAGCTTAGCAGCCGTTCTCATTGCTTGTTGCGAGTAACTGTGATCGGGGAGAGTTTAATCAATGGCCAGAAAACAAGGAGTCACCTTTGGctagtagacttagcaggtagtgagcgtgtgggaaaaactgaagctgagggagaaagactgaaggaatctcaattcataaacaagtctctttcggcacttggtgatgttatttctgcccttgcttccaaagcatcccacatcccttacagGAACTCAAAGCTCACTCATATACTGCAGAGCTCTTTAGGTGGAGATTGTAAAACGTTAATGTTTGTCCAGGTAAGTCCAAGTTCAGCGGACTTAGGAGAGACACTTTGTTCATTGAATTTTGCCTCCCGTGTCCGTGGAATTGAGAGTGGCCCAGCTCGCAAACAAGTAGACCTCAGTGAGCTGTTTAAGTACAAGCAAATGGCAGAAAAGGTCAAACAAGAAGAGAAGGAAACAAAGAAATTGCAGGATAGCCTGCAAACCTTGCAACTTAGACTATCTGCGAAAGAGTATCATTGTAAAAGCCTTCAGGAAAAGGTACGGGACCTTGAGAACCAAATAGCAGAAGAAAGAAAAACTAGACTAAAGCAAGAAAGTAGATCTCTTGCTGCTGTTTCAGCTCAACCTCCAACGTTTAAACACACAGCAGCTCAAAAAACCATGGCAGATAAGAAGCCACCACTGAATCCTTCGAAACTGAGAATGCCCCTTAGAAGGATAACCAATAACTTGCCTCCCCAATCTCCTATAACATCAAAGAGATACACACATCAAATGAATGGTAAGGAAAATTCTGCTAGAAGGAGTTCAATGACAACAAACATAGAAGGCTTTGCAAGACCAAGAAGTAGGGTATCCATTGCCATGAGACCACCTGTACAAGTACAGTCAACTGCGCAGCTCCTTCAGCCAAGGAGGAGAGTCTCCATTGCTACATTGCGACCTGATCCAACATCTGAAATGACAACTCCACTCCGTACTTCAGTGATGAGGAACCAAAGAAGGGGCCGGTATTCAAATTTGTTTGCTCCATTGCCAGAGATGAGAACAACTTCAATTGAAACAACTCCAAATTCTATCAGGAGCAGCAGCAAGTTTATGGGCAGTCCAGTACATGCACAGGCAGGTGGTTCACGGATGGGTAGACACCCGACTGCTGTTGCGCTGCAACGAAGATCTTTTATCTGGAGTCCTCTCAAGCTGAGAGAAATGAAAAACAGCCGAAAGTCATTACTCTTGCCATCTAAATTGCAATAG 2313 0.3748 MELNDQSTQIQILAEKFHRFVLDCELKQSPNARPSDDNNEAKKINENTDSMDENSISNGGIHENSPDPGHTLPILKKILDLSTKIQDLKKQHVALSDHVKLTTDSFPSLDVLNSIQLLGSEYELLKKKYLQESSERRRLYNEVIELKGNIRVFCRCRPLSESETANGFASVVNFESSSENELQVVCSDSSKKQFKFDHVFRPGDNQEAVFSQTKPIATSVLDGFNVCIFAYGQTGTGKTFTMEGTPEERGVNYRTLEELFRISEERKGVMKYELHVSMLEVYNEKIRDLLVENSAQPTKKLEIKQAAEGTQEVPGLVEACVHGTEDVWELLKTGNRVRSVGSTSANELSSRSHCLLRVTVIGESLINGQKTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKASHIPYRNSKLTHILQSSLGGDCKTLMFVQVSPSSADLGETLCSLNFASRVRGIESGPARKQVDLSELFKYKQMAEKVKQEEKETKKLQDSLQTLQLRLSAKEYHCKSLQEKVRDLENQIAEERKTRLKQESRSLAAVSAQPPTFKHTAAQKTMADKKPPLNPSKLRMPLRRITNNLPPQSPITSKRYTHQMNGKENSARRSSMTTNIEGFARPRSRVSIAMRPPVQVQSTAQLLQPRRRVSIATLRPDPTSEMTTPLRTSVMRNQRRGRYSNLFAPLPEMRTTSIETTPNSIRSSSKFMGSPVHAQAGGSRMGRHPTAVALQRRSFIWSPLKLREMKNSRKSLLLPSKLQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00547 770 Gene3D Kinesin motor domain 144 516 IPR036961 -
Car04g00547 770 MobiDBLite consensus disorder prediction 551 567 - -
Car04g00547 770 PRINTS Kinesin heavy chain signature 223 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00547 770 PRINTS Kinesin heavy chain signature 343 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00547 770 PRINTS Kinesin heavy chain signature 374 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00547 770 PRINTS Kinesin heavy chain signature 423 444 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00547 770 Pfam Kinesin motor domain 155 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00547 770 MobiDBLite consensus disorder prediction 28 69 - -
Car04g00547 770 ProSiteProfiles Kinesin motor domain profile. 149 473 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00547 770 PANTHER KINESIN-LIKE PROTEIN KIN-14S 88 766 - -
Car04g00547 770 SMART kinesin_4 147 481 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car04g00547 770 Coils Coil 490 552 - -
Car04g00547 770 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 509 IPR027417 -
Car04g00547 770 MobiDBLite consensus disorder prediction 709 734 - -
Car04g00547 770 CDD KISc_C_terminal 147 474 - -
Car04g00547 770 PANTHER KINESIN-RELATED 88 766 IPR027640 GO:0003777|GO:0007018
Car04g00547 770 MobiDBLite consensus disorder prediction 593 623 - -
Car04g00547 770 MobiDBLite consensus disorder prediction 546 623 - -
Car04g00547 770 ProSitePatterns Kinesin motor domain signature. 373 384 IPR019821 GO:0003777|GO:0005524|GO:0007018
Car04g00547 770 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00547 Car-Chr4 5482860 5486991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00547 115 500 Calmodulin-binding Proteins AT5G65930 41.192 2.72e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00547 K10406 - gmx:100788477 1137.48