Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00535 ATGGATCATCAAGGTCATGGTCAGAACCCATCTATGGGAGTTGTTGGTAGTGGACAAATGGCTACATATGGCTCTAATCCATACCAGCCCAATCATCTAACTGGGTCACCTGGGATGGTTGTTCCCTCTGTTGGGACTATTCAATCCACTGGTCAACCTGATGGATCTCAGCTGGGAcaacatcaacttgcttatcagcatatgcatcagcaacaacaacagcagcaacaacaacaactCCAGGCCTTTTGGGGAAATCAATATCAAGAAATCGAGAAGGTAACTGATTTCAAGAACCACAGCCTTCCTTTAGCAAGGATCAAGAAGATTATGAAGGCTGATGAGGATGTGAAGATGATATCAGCAGAGGCGCCGGTTGTATTTGCTAGGGCCTGTGAAATGTTCATACTAGAGTTAACCTTGCGTTCTTGGAATCACACTGAGGAGAACAAAAGGCGAACACTTCAAAAGAATGATATTGCAGCAGCCATCACAGGAACTGATATCTTTGATTTCTTGGTTGACATTGTGCCTCGGGAGGACTTGAAAGATGAAGTGCTTGCATCAATACCAAGAGGAACAATGCCTGTTGCAGGACCTGTTGATGGACTTCCTTATTGCTATATGCCGCCTCAACATGCACAGCAACCTGGAACTGCTGGTCTCATGATGCACAATCCAAATGTATATGCTCCGCAGTCTCATCCATACATGGCACCTCAAATGTGGCCCCAACCGCCGGATCAACAACAATCGTCTTCAGATCATTAG 771 0.4202 MDHQGHGQNPSMGVVGSGQMATYGSNPYQPNHLTGSPGMVVPSVGTIQSTGQPDGSQLGQHQLAYQHMHQQQQQQQQQQLQAFWGNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVKMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITGTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPVDGLPYCYMPPQHAQQPGTAGLMMHNPNVYAPQSHPYMAPQMWPQPPDQQQSSSDH 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00535 256 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 256 - -
Car04g00535 256 MobiDBLite consensus disorder prediction 10 26 - -
Car04g00535 256 SUPERFAMILY Histone-fold 67 173 IPR009072 GO:0046982
Car04g00535 256 MobiDBLite consensus disorder prediction 1 26 - -
Car04g00535 256 Gene3D Histone, subunit A 63 179 IPR009072 GO:0046982
Car04g00535 256 Pfam Core histone H2A/H2B/H3/H4 62 164 IPR007125 GO:0003677
Car04g00535 256 MobiDBLite consensus disorder prediction 233 256 - -
Car04g00535 256 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00535 Car-Chr4 5409701 5411790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00535 1 243 CCAAT-HAP5 Transcription Factor Family AT1G08970 61.633 6.25e-86 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Car04g00535 Histone 4.2e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00535 K08066 - gmx:100527803 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02989 03 75008736 75016111 Car04g00535 04 5409701 5411790 PCT