Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00533 ATGGAAGTTAATGCTACCACCACTGTACCTGCAGGGCCACCTAGAAAGAACCATACTTTCATACACCATTATCATCACTTACATTCAGAAAAACATTATCATAGCCATGGCCATTTTTCCTTCAAAACCATTCTCATAGCCATCATATTTGTGGCCTTAATTATGCTAATATTTACCATTTTTATGGTTGTATGGTTGATCCGTCGTCAAAAATCTTCCAAAGAGAATGGGACTTCCAAAGATGACAGTGAGAGTAGAGTGCTTCATGACAAAACCAACAGGCTCATGGCTTCAACAATCATGTCATTTGATTCTAGCCCAGATGTTAAAGGTGGGTGTCTTTATGGGGGAAACTTGAGCAGGACACCAACACCTAAATTTAGAGGAGTGCAAGTTTTCACGTATAGGGAGCTAGAAGTTGGTACGGATGGGTTCGATGAAGCAAATGTGATTGGTAATGAAGCAAATGGATTGATGTATAAAGGAATACTAAGTGATGGTACTTTGGCAGCAATTAAGTTGCTGCACAGTGAGGGTAAGCAAGGAGAGCGTGCTTTCAGAATAGAGGTCGATCTCCTTAGCCAATTGTGCTCTCCTTATTTGGTGGAGTTACTTGGCTATTGTGCTGACCAACACCACAGGTTATTGATTTTTGAATACATGCCCAATGGTACACTCCAACACCATCTTCATTCCCACAAGGATCAAACTCAACTATTGGATTGGTGGACCCGGATGAGGATAGCCCTTGATTGTGCTAGAGCCTTGGAGTTCCTGCATGAACATGCTATCTCACCCGTGATCCACAGAGACTTCAAGAGTTACAATGTTCTACTGGATCAGAATTTCCGTGCCAAGGTGTCAGATTTTGGTTTGGCTAAGATGGGATCAGAGAAGAAAAACGGTCAGGTTTCTACCCGTGTGCTGGGGACCACTGGATATCTAGCACCAGAGTATGCCTCTACCGGTAAGCTTACTACAAAATCAGATGTTTACAGCTATGGCGTGGTTCTTCTCGAACTGCTAACGGGACGTGTACCAGTTGATATTAAGCGGCCTCCTGGAGAACATGTCCTTGTTTCTTGGGCTCTTCCAAGGTTGACAAACCGAGAAAAAGTGGTGGAAATGGTTGATCCAGCTTTACACGGGCAGTATTCCAAGAAGGCTTTAATTCAGGTAGCTGCCATCGCAGCTATGTGCATACAGCCAGAAGCTGATTACAGGCCACTCATGACAGATGTTGTACAATCATTGATACCAATTATGAGGAACCAGTCTCTTTCTAGTTCCCTAAGATTTCAGAAACAAATACCAAGTCATTAG 1323 0.4308 MEVNATTTVPAGPPRKNHTFIHHYHHLHSEKHYHSHGHFSFKTILIAIIFVALIMLIFTIFMVVWLIRRQKSSKENGTSKDDSESRVLHDKTNRLMASTIMSFDSSPDVKGGCLYGGNLSRTPTPKFRGVQVFTYRELEVGTDGFDEANVIGNEANGLMYKGILSDGTLAAIKLLHSEGKQGERAFRIEVDLLSQLCSPYLVELLGYCADQHHRLLIFEYMPNGTLQHHLHSHKDQTQLLDWWTRMRIALDCARALEFLHEHAISPVIHRDFKSYNVLLDQNFRAKVSDFGLAKMGSEKKNGQVSTRVLGTTGYLAPEYASTGKLTTKSDVYSYGVVLLELLTGRVPVDIKRPPGEHVLVSWALPRLTNREKVVEMVDPALHGQYSKKALIQVAAIAAMCIQPEADYRPLMTDVVQSLIPIMRNQSLSSSLRFQKQIPSH 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00533 440 PANTHER OS01G0750732 PROTEIN 2 432 - -
Car04g00533 440 PANTHER SERINE/THREONINE-PROTEIN KINASE CDL1-LIKE 2 432 - -
Car04g00533 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Car04g00533 440 Gene3D Phosphorylase Kinase; domain 1 118 220 - -
Car04g00533 440 SUPERFAMILY Protein kinase-like (PK-like) 125 418 IPR011009 -
Car04g00533 440 ProSiteProfiles Protein kinase domain profile. 145 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00533 440 Pfam Protein tyrosine and serine/threonine kinase 149 418 IPR001245 GO:0004672|GO:0006468
Car04g00533 440 Gene3D Transferase(Phosphotransferase) domain 1 221 436 - -
Car04g00533 440 CDD STKc_IRAK 151 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00533 Car-Chr4 5378653 5381882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00533 42 431 Receptor kinase-like Gene Family AT3G58690 52.911 8.35e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Car04g00533 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00533 - - mtr:MTR_1g082580 746.888