Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00527 ATGGCTGTGTTAACCTCACCACTTCATTTTTCAGCTTCATATCTGAGCAGCACAACCACAAGCACCATCGTTGCTCTTTGTGTATTCTTCGCACTTCTCTGCGCTTGCATAGTCATTGGCCATCTTCTCGAAGAGAGTCGTTGGGTCAATGAATCCATCACTGCACTTCTTCTGGGTTTGTGTTCTGGAGTGGTGGTGCTGATGGTCACCAAGTTCCGTAGTGTCGATATTCTAATGTTCAGTGAAGACTTGTTCTTCCTTTACTTGCTTCCACCTATCATCTTCAATGCCGGTTTCCAAGTCAAGAAGAAACGGTTCTTCAGGAATTTCAATCATATTCTTCTGTTTGGAGTTCTAGGGACAGTTATTTCATTCTGTTTCATATCTCTTGGTGCTTTTCTGTTCATTAATAGGATTGGCACAGTTAACCTGGACATAAAAGATATTCTAGCCATTGGTGCCATACTGTCAGCAACAGACTCAGTTTGTACATTACAGGTTCTAAGTCAAGATGAAACACCTTTGCTTTACAGCATTGTATTCGGCGAAGGAGTAGTAAACGATGCTATGTCTATTGTTATTTTCAATTCAGTCCAAACACTTAACTTCAGCACCATCAATCCTATTACAGCCTTGGAATTGTTGGGGACCTTCCTTTACCTCTTTTGCACTAGTACTATCCTTGGCATAGCAGTTGGCCTTTTAAGTGCTTATATTATTAAAACACTTTACTTTGGAAGGCACTCTACTGATCGTGAAGTTGCACTTATGATGTTGATGGCATATTTTTCATATATGATTGCTGAGCTTTTGGCTCTCAGTGGAATTTTAACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACATGGCACAACGTTACAGGAAACTCAAGGATAACAACAAAGCACTCCTTTGCAACCATCTCATTTATTGCTGAAACCTTTATTTTTCTATATGTTGGCATGGATGCTTTAGACATTGACAAATGGAAAACAAGCAAAGCCAGCATAGTAACTTCAGTTGCTGTGAGTTCAACATTTTTGGCATTAGTTTTGATTGGAAGAGCTGCTTTTGTGTTCCCTATTTCATACATTGCAAATTGTATGACAATAAGAGAGAGCACCAAAATCAAGTTTCGATCGCAGTTTATAATATGGTGGGCTGGCCTAATGAGAGGTGCAGTGACTATTGCATTGTCTTGCAACCAGTTTTCAAATTCCAAGATAACATCAGCTGAAGACTCAGCATTAATGATCACCTCAACAATAAACCTAGTCTTATTCAGTACTATGGTATTTGGTTCCATAACAAAGCCTCTGATTGAGGCTGTGCACCTAAGGCCTTCAAAACAAGCCATTTCTGATTCAACTGATTACCATGAAGAGCTAAAATTACTATTCCTTGAAAGCAATGGTTCCATTGACCAAAGCATCAATCAGGCATTCCACAGAAGAAGTAGCTTGAGTTTGATGATGTGTTATCCTGCTACTACAGTTCACTACTATTGGAGGAAATTTGATTATATGTTTATGAGACCCATATTTGGTGGTAGCGGTTTTGTTCCGGTTGTACCTGGTACACCACTCGGTGAAGAGGAGATTTCTTGGAACACAAACAACCTCGGACCCgtttag 1638 0.3956 MAVLTSPLHFSASYLSSTTTSTIVALCVFFALLCACIVIGHLLEESRWVNESITALLLGLCSGVVVLMVTKFRSVDILMFSEDLFFLYLLPPIIFNAGFQVKKKRFFRNFNHILLFGVLGTVISFCFISLGAFLFINRIGTVNLDIKDILAIGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDAMSIVIFNSVQTLNFSTINPITALELLGTFLYLFCTSTILGIAVGLLSAYIIKTLYFGRHSTDREVALMMLMAYFSYMIAELLALSGILTIFFCGIVMSHYTWHNVTGNSRITTKHSFATISFIAETFIFLYVGMDALDIDKWKTSKASIVTSVAVSSTFLALVLIGRAAFVFPISYIANCMTIRESTKIKFRSQFIIWWAGLMRGAVTIALSCNQFSNSKITSAEDSALMITSTINLVLFSTMVFGSITKPLIEAVHLRPSKQAISDSTDYHEELKLLFLESNGSIDQSINQAFHRRSSLSLMMCYPATTVHYYWRKFDYMFMRPIFGGSGFVPVVPGTPLGEEEISWNTNNLGPV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00527 545 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 455 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00527 545 PANTHER SODIUM/HYDROGEN EXCHANGER 14 536 - -
Car04g00527 545 Pfam Sodium/hydrogen exchanger family 28 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car04g00527 545 PANTHER SODIUM/HYDROGEN EXCHANGER 14 536 IPR018422 GO:0006812|GO:0015299|GO:0016021
Car04g00527 545 Gene3D - 145 197 - -
Car04g00527 545 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00527 545 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00527 545 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00527 545 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00527 Car-Chr4 5299999 5308778 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00527 15 529 Antiporters AT3G05030 61.069 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00527 K14724 - qsu:112009828 735.332