Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00526 ATGCTAAATATAGCTATGTTACCCTCACCACTTGATTTTTCAACTTCATATCTAAGCACAAGCACAATTGTTGCACTTTGTGTATTCTTCGGACTCCTCTGCTCTTGCATCATCGTTGGCCACCTTCTCGAAGAGAATCGATGGGCCAATGAATCCATCACTGCCCTCCTTCTTGGTTTGTGTTCTGGAGTGGTGGTGTTACTAGTGACCAAGTTCCGAAGTACCAAGATTCTAATATTCAGTGAAGACTTGTTCTTTCTGTACTTGCTTCCACCAATCATTTTCAATGCAGGTTTCCAAGACAAGAAGAAGCAGTTCTTCAGGAATTTCATTACTATACTTCTGTTTGGAGTCCTTGGGACAGTTATTTCTTTCTGTCTCATATCTCTTGGTGCTTTTCTGCTATTTACAAGAATTGGCATAACCAACCTGGGCATAAAAGATCACCTAGCCATTGGTGCCATATTGTCAGCAACTGACTCAGTTTGTACATTACAAGTTCTGAGTCAAGATGAAACACCTTTGCTTTACAGCATTGTATTTGGAGAAGGAGTAGTGAATGACGCCACATCTATTGTTCTTTTCAATTCAGTCCAAACACTTAACTTCAGCACCATGAATGCTATTACAGCCTTGAAATTGTTGGGGACCTTCTTTTACCTCTTTTGCACTAGTACTGCCCTTGGTATAATAGTTGGCCTTTTAAGTGCTTACATTATTAAAACTCTTTACTTTGGAAGGCACTCTACAGATCGCGAAGTTGCACTTATGATGTTAATGGCATATTTGTCATATATGATCGCTGAGTATCTTTTGCAGCTTTTGAATCTCAGTGGGATTTTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTATACATGGCACAACGTTACAGGAAGCTCGAGGACAACAACCAAGCACGCCTTTGCAACTATCTCATTCATAGCTGAAACCTTTATATTTCTATATGTTGGCATGGATGCTTTCGACGTTGACAAATGGAAAACAAGCAAAGCCAGCATAGGAACTTCAGTCGCTGTCAGCTCAACTTTGATTGCATTAGTTTTGATTGGAAGAGCAGCTTTTGTTTTCTCTATTGCAAACATTACAAATTGCACCAAAACAAGAGAGAGCGCCAAAATCGAGTTTCGATCGCAGTTTATAATATGGTGGGCAGGCCTAATGAGAGGTGCAGTGACCATTGCCTTATCTTATAACCAGTTTTCAAAATCTGAGATAGCATCAACTGAAGACTCTGCATTAATGATCACATCAACTATAATCCTTGTCTTATTCAGTACTGTGGTATTTGGTTCCATAACGAAGCCTTTGATTGAGGCTGTGAAGTTAAGGCAATCAAAACCAGCTATTTCTGATTCCACTGATAATCAAGAGGATCTGAGATTACTATTCCTTGAAAGCAATTGTTCCATCAACCAAACAAATCATCACGAATCTCAATCTCGCAGACGAAGTAGCCTTAGTTTGATGATACGTCATCCTACTACTACGGTTCACTACTTTTGGAGGAAATTCGATGATAAGTTTATGAGACCCGTATTTGGTGGCAGAGGTTTTATTCCGGCTGTTCCTGGTTCACCACCTGCTGAAGAGGAGATTTCTTGA 1629 0.3984 MLNIAMLPSPLDFSTSYLSTSTIVALCVFFGLLCSCIIVGHLLEENRWANESITALLLGLCSGVVVLLVTKFRSTKILIFSEDLFFLYLLPPIIFNAGFQDKKKQFFRNFITILLFGVLGTVISFCLISLGAFLLFTRIGITNLGIKDHLAIGAILSATDSVCTLQVLSQDETPLLYSIVFGEGVVNDATSIVLFNSVQTLNFSTMNAITALKLLGTFFYLFCTSTALGIIVGLLSAYIIKTLYFGRHSTDREVALMMLMAYLSYMIAEYLLQLLNLSGILTIFFCGIVMSHYTWHNVTGSSRTTTKHAFATISFIAETFIFLYVGMDAFDVDKWKTSKASIGTSVAVSSTLIALVLIGRAAFVFSIANITNCTKTRESAKIEFRSQFIIWWAGLMRGAVTIALSYNQFSKSEIASTEDSALMITSTIILVLFSTVVFGSITKPLIEAVKLRQSKPAISDSTDNQEDLRLLFLESNCSINQTNHHESQSRRRSSLSLMIRHPTTTVHYFWRKFDDKFMRPVFGGRGFIPAVPGSPPAEEEIS 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00526 542 PANTHER SODIUM/HYDROGEN EXCHANGER 12 540 IPR018422 GO:0006812|GO:0015299|GO:0016021
Car04g00526 542 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 28 466 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00526 542 Pfam Sodium/hydrogen exchanger family 40 447 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car04g00526 542 Gene3D - 145 197 - -
Car04g00526 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00526 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00526 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00526 542 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00526 542 PANTHER SODIUM/HYDROGEN EXCHANGER 12 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00526 Car-Chr4 5293697 5298568 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00526 14 535 Antiporters AT3G05030 60.985 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00526 K14724 - qsu:112009828 786.178