Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00512 ATGGAATGCAACAAGGACGAGGCTGTGAGGGCTAAGCAAGTGGCAGAAAGTAGAATCCAAAGGGGTGAATTTGTAGAGGCACTGAAGTTTGCTAACAAGGCTAAAAAGCTGTATCCTGATGTTGAAAACATTGCTCAGATCCTTGCAGTTTGTGAGGTTCACAAGGCTGCACAGAACAAACTCTCTGGGTCTGTAATGGATTGGTATGGAATTCTTCAGACTGAAAGACTTTCTGAGGAAGCAATAATAAAGAAACAGTATAGAAAGCTTGCACTGCTACTTCATCCTGATAAAAATAAATTTGCTGGCGCAGAAGCTGCTTTCAAGTTGATTGTGGAAGCCAATGGGGTTTTGAGTGACCAAGCAAATCGATCTTTATATGACATGAAGCTTAAAGTCCATCCGAGAACTGCAGTACCTAAGACCTCATCCCATCAATCAAATGGGAATGTATCTGCAGCAAAACATGTTCCCAATGTAACAAAATCTCGGAAAAAGTGTTCTTCAAACTTCCCTTCTTGGAATCCCCATCTGAAAGCAGCACAACCGACATTCTGGACAACTTGCAAACATTGTAACACCAGGTTCAACTTCTACACAACATTTTTTAATATGGCCGTACTTTGTCCAAAATGCAGGCAATCATTTGTAGCTCATGCTTTTAGTCACCAGGCTGCCCCACCATTTGTATCGACTATTGCCCCAAATTATGCTCCAATGCAGGCTCCACCAAAACCAGCCTCAAGAAGTAATGGTGGAAACCCCCTTGGTGGTGGATGGGCAGATGCCTTTGTGCAATCGTATCCTTCATTTATGAAAACCTGTGTTACTGGAGTTGGTAAGCAACAGAAAGGTGAAAAGAATGAAGATGGCCATGTTCCTGTGTTGAAAACTATGGATTCACAGACCTCCAAATATGTTGGAAGTAAGAGGGTGAGACAGGCAGCACCAGATTTAAAAGAGAGCTTCAACACTGGAAATGTCAATGAAAAGAAAGACGTCAATGTTCGAGGAAATGATGTTGATCCTTCAATATTGAATGTAAGAAGGTCTTCCAGACAAAAGCAACATGTTTCATATGTGGAAAAATCTGAAGTTGACAATTTTGATATTCCTTCCAAAAAGCCACGACAAAACGGATCATTGCACAATGATGAAGTTCAGAAAAAGAATGCGTCTGAAGAAACATTTGTAAGGAATACAAGGAAAGATGAGCATTCTCATGTTCAAGGAGATAAGGTATTCGAGTCAGATCTTGATCCTAGAACGTTAGACAAGGAAAACTGCTCGCCATTGAATTCAAATGTCCCTTCTACTCCAGAGGTCATTCATTGCCCTGATCCAGATTTTAATGATTTTGATAAGGATAGGGCGGAGGGCCATTTTGGTGTTAATCAAGTCTGGGCAATTTATGATTCCACTGATGCTATGCCGAGATTTTACGCTCTTGTTAAGAAAGTGGCCTCCCCTTTCAAGTTGCAGTTTACTTGGTTGGAACCTAACCCAGATGACCAAGGTGAGGCTGACTGGCATTATGCAGATTTGCCTATTGCTTGTGGTAAATTCAAACTTGGTGACTCTCAGAAAACAACAAATAGTGAAATGTTCTCTCATCAGATTCAGTGTATAAAAAGAAATGGCAAAAGTTCTTACCTAGTGTTTCCCAATAAGGGAGAAACTTGGGCGATTTTCAGAAATTGGGATATCAAATGGAGTTCTAATCCTGAAAATTATTTGAAGCGTGAATTTGCTTATGTGGAAATCCTATCAGATTTTGCTGAAAATGTTGGTATTGAAGTAGCTTACCTAAGCAAAGTGAAAGGGTTTGTTAGCCTTTTTGAGAAAACTGGAAAGAATGGAGACAGCATGCTTTGTATTCCGCCTAATGAGCTTTATAGATTCTCACATCGAATCCCTTCATATAAGATGAGTGGTGATGAAAGGGAAGGTGTTCCAAGAGGCTGTTTTGAACTTGATCCCGCTGCCCTGCCAACAAATTTCGATGATGCTGATTGTGGTGATGTAAATACTGGAGTACCAGCAAGGGAATAA 2052 0.4059 MECNKDEAVRAKQVAESRIQRGEFVEALKFANKAKKLYPDVENIAQILAVCEVHKAAQNKLSGSVMDWYGILQTERLSEEAIIKKQYRKLALLLHPDKNKFAGAEAAFKLIVEANGVLSDQANRSLYDMKLKVHPRTAVPKTSSHQSNGNVSAAKHVPNVTKSRKKCSSNFPSWNPHLKAAQPTFWTTCKHCNTRFNFYTTFFNMAVLCPKCRQSFVAHAFSHQAAPPFVSTIAPNYAPMQAPPKPASRSNGGNPLGGGWADAFVQSYPSFMKTCVTGVGKQQKGEKNEDGHVPVLKTMDSQTSKYVGSKRVRQAAPDLKESFNTGNVNEKKDVNVRGNDVDPSILNVRRSSRQKQHVSYVEKSEVDNFDIPSKKPRQNGSLHNDEVQKKNASEETFVRNTRKDEHSHVQGDKVFESDLDPRTLDKENCSPLNSNVPSTPEVIHCPDPDFNDFDKDRAEGHFGVNQVWAIYDSTDAMPRFYALVKKVASPFKLQFTWLEPNPDDQGEADWHYADLPIACGKFKLGDSQKTTNSEMFSHQIQCIKRNGKSSYLVFPNKGETWAIFRNWDIKWSSNPENYLKREFAYVEILSDFAENVGIEVAYLSKVKGFVSLFEKTGKNGDSMLCIPPNELYRFSHRIPSYKMSGDEREGVPRGCFELDPAALPTNFDDADCGDVNTGVPARE 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00512 683 MobiDBLite consensus disorder prediction 139 164 - -
Car04g00512 683 MobiDBLite consensus disorder prediction 355 372 - -
Car04g00512 683 Pfam DnaJ domain 67 128 IPR001623 -
Car04g00512 683 Pfam Domain of unknown function (DUF3444) 441 647 IPR024593 -
Car04g00512 683 MobiDBLite consensus disorder prediction 379 425 - -
Car04g00512 683 PRINTS DnaJ domain signature 69 87 IPR001623 -
Car04g00512 683 PRINTS DnaJ domain signature 87 102 IPR001623 -
Car04g00512 683 PRINTS DnaJ domain signature 103 123 IPR001623 -
Car04g00512 683 PANTHER - 1 670 - -
Car04g00512 683 CDD DnaJ 67 120 IPR001623 -
Car04g00512 683 SMART dnaj_3 66 123 IPR001623 -
Car04g00512 683 MobiDBLite consensus disorder prediction 322 443 - -
Car04g00512 683 Gene3D DnaJ domain 65 171 IPR036869 -
Car04g00512 683 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Car04g00512 683 MobiDBLite consensus disorder prediction 138 164 - -
Car04g00512 683 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 670 - -
Car04g00512 683 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00512 Car-Chr4 5215814 5217865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00512 4 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.618 5.70e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00512 - - mtr:MTR_1g060440 921.383