Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00506 ATGGCTATTGAAATTGCTTCTTTTGTCTCTAATAAATTGCAAATGCTGGCCACTTCTGATCATGCTTCCGTAGTATCTATGAACTTGTTTGTGGCACTTCTATGTGCTTGTATTGTTCTTGGCCATCTTCTTGAGGAGAATAGATGGATGAATGAGTCCATCACTGCCCTTTTGATTGGGATTTGTACTGGTGTAGTCATTTTGCTGTTTAGTGGTGGAAAAAGCTCGCATATTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTTCCGCCTATAATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAGTTTTTTCGCAACTTCATGACTATCACATCGTTTGGTGCTGTGGGCACATTAATATCTTGTTGCATCATAACTTTGGGTGCTACCCAAGCTTTTAAGAGGATGGATATTGGACCGCTGGAACTGGGCGATTACCTAGCAATTGGAGCAATATTTGCCGCGACAGATTCTGTTTGCACATTACAGGTGCTAAATCAGGATGAGACACCTTTGTTGTATAGTCTTGTGTTTGGAGAAGGTGTTGTGAATGATGCTACCTCAGTGGTTCTTTTCAATGCAATCCAAAGCTTTGATCTCAACCGACTTAACCCTTCAATTGCATTGCACTTTTTGGGCAACTTCTTGTATTTGTTTGTAGCAAGCACACTACTTGGGGTTTTGACAGGTCTGCTTAGTGCTTATGTTATTAAGAAGCTGTATATTGGCAGGCACTCAACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCATACCTCTCCTATATGCTGGCTGAGTTATCCTATCTGAGTGGTATTCTCACGGTATTCTTTTGTGGTATTGTTATGTCTCATTATACTTGGCATAATGTGACTGAGAGTTCAAGAGTCACTACCAAGCATGCTTTTGCTACCTTGTCGTTTGTTGCCGAGATCTTTATCTTTCTTTATGTTGGTATGGATGCCCTGGACATTGAAAAATGGAAGTTTGTTAGTGATAGTCCTGGAACATCTGTAGCAGCAAGTTCAGTATTGTTGGGTCTGATACTTCTTGGAAGAGCTGCGTTTGTTTTCCCCTTATCCTTCTTATCCAACTTGACTAAAAAATCACCGTATGAGAAGATCTCATTCAGACAGCAAGTGATCATTTGGTGGGCTGGCCTTATGAGAGGTGCTGTTTCAATGGCACTCGCATATAATCAGTTCACCATGTCGGGGTATACTCAACTGCGTAGCAATGCAATCATGATCACCAGCACCATCACTGTTGTCCTTTTCAGCACAGTGGTGTTTGGTTTGCTGACTAAGCCACTCATAAGGCTTCTACTACCTCATCCTAAAGTCACAACCAGCATGACAACCACAGAGCCATCTACTCCAAAATCATTCATTGTCCCACTTCTAGGAAATGCCCAAGATTCTGAAGCTGATCTCGAGGGCCATCAAATTCACCGTCCAAACAGCATCCGTGCCTTACTAGCCACTCCAACTCACACTGTTCATCGATTATGGCGTAAGTTTGATGATTCGTTCATGCGTCCCGTCTTTGGCGGCAGGGGTTTTGTTCCTGTAGAACCTGGCTCACCAAGTGAACGCAATGGTCAACAATGGCATTGA 1629 0.4242 MAIEIASFVSNKLQMLATSDHASVVSMNLFVALLCACIVLGHLLEENRWMNESITALLIGICTGVVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTITSFGAVGTLISCCIITLGATQAFKRMDIGPLELGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLNRLNPSIALHFLGNFLYLFVASTLLGVLTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELSYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSVAASSVLLGLILLGRAAFVFPLSFLSNLTKKSPYEKISFRQQVIIWWAGLMRGAVSMALAYNQFTMSGYTQLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHPKVTTSMTTTEPSTPKSFIVPLLGNAQDSEADLEGHQIHRPNSIRALLATPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPSERNGQQWH 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00506 542 Gene3D - 147 198 - -
Car04g00506 542 PANTHER SODIUM/HYDROGEN EXCHANGER 2 8 541 - -
Car04g00506 542 PRINTS Na+/H+ exchanger signature 85 96 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00506 542 PRINTS Na+/H+ exchanger signature 99 113 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00506 542 PRINTS Na+/H+ exchanger signature 114 122 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00506 542 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00506 542 PANTHER SODIUM/HYDROGEN EXCHANGER 8 541 IPR018422 GO:0006812|GO:0015299|GO:0016021
Car04g00506 542 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 26 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Car04g00506 542 Pfam Sodium/hydrogen exchanger family 30 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00506 Car-Chr4 5174852 5181288 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00506 9 540 Antiporters AT3G05030 78.358 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00506 - - gmx:732573 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03015 03 75213960 75218251 Car04g00506 04 5174852 5181288 PCT