Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00492 ATGGCATCCTTCCAAAACGCCGTCGTTTTATTCAAACAAGAATATATCGAAGACGAATTGGAAGAGGAATACGACGAAGAAGAAGACGACGTCGTTTTAGGCGAACCAGACGAAGAAGACGACAACAACAACAAAACCGAACCTCCTCCTTCAACCTCCTCCGCCATCACCACCGTCATATTAGCCTTACCAAACGCAGCAACAACCGTCGTCGACGGTTCCCCTGAGCCAAAACGGCAGCACACGGAGGAGAAGAAGTCAATGGACGATCCGCGGAAAATGTTCCAGCGTCTCTGGACGGACGAAGACGAGATCGAACTCTTGCAAGGTTTTCTCGATTACAACGCGAATCGAGGAACCTATCACAACGACACCGCTTCCTTCTACGATCGAATTAAGTCGAAGCTTCAACTCGAATTCAACAAGAGCCAGCTCGTCGAGAAACTCCGAAGGTTGAAGAGAAAGTACCGCAACGCTGTCAAAAAAATCGATTCTGGTAAGGAGGTTAATTTCAAAAGCCCTCATGATCAAGCTACCTTCGAAATCTCGCACAAAATTTGGAACAGCGCAGCTCCAGTCGGCAATCCCGTCGAAGATGACGACGAAATCAACCCTAATACCAACCCTAACCCTAATTCAGGTCATACAACGCCGGTGAAGAATGAGCCTATCATTGAGAAGAAAACTGCACAATCAAGGAAGCGATCGCGAACAACAGCATCAACGGAGGAGAAGCGTGAGTTGAATAATTCTCCATTGTTGaataatgataatcataattatcataagcataatcataatactaataacaataatagcaaaaatcatgatGTTGTTGATGGTGGTGATAAATGTAACGGAAGGCAAAACGTACCTGGTTTGATTGAAGAAACTGTGAAGAGTTGTTTGACGCCGGTGTTGAAGGAGTTAGCGAGCAGTAGTAGTGCAATGGGAAGTCCTTATGGATTTGGGGGAAGAGGGTTTGGGGTTGGAGGTTTTTCAATGAACACTATGCCATTGGGTTTTTTGAATTTGGGGAGTGGGGAAAAGGTGGTTGATGAAAAGTGGAGGAAGCAACAGATACTGGAGCTGGAAGTGTATTCCAAGCGATTGGAGCTTGTGCAGGATGAGATCAAAGTTGCTTTGGATGAGTTGCGATCATCAACTGGAACTGGAGTTAGAGGAGTACAACAACAGTTCAATAATGTTATATTTTTTTGTTTAGAATTTTCTTGTAGAAAGAATTCAGAATGCAGAGGATTATTGGTTAAAACGGGAATGATAGTGATATACTCATATACAATGCCATTTTCTAATGTTCAACCTCAGAAAATTATTTGTGATTATGGTGTCATCAATTGTGGTTTTGCTGAGAGTACTGGAGGCATCGAAATCAATTGTGGTTTTGCTGTTTAA 1416 0.4188 MASFQNAVVLFKQEYIEDELEEEYDEEEDDVVLGEPDEEDDNNNKTEPPPSTSSAITTVILALPNAATTVVDGSPEPKRQHTEEKKSMDDPRKMFQRLWTDEDEIELLQGFLDYNANRGTYHNDTASFYDRIKSKLQLEFNKSQLVEKLRRLKRKYRNAVKKIDSGKEVNFKSPHDQATFEISHKIWNSAAPVGNPVEDDDEINPNTNPNPNSGHTTPVKNEPIIEKKTAQSRKRSRTTASTEEKRELNNSPLLNNDNHNYHKHNHNTNNNNSKNHDVVDGGDKCNGRQNVPGLIEETVKSCLTPVLKELASSSSAMGSPYGFGGRGFGVGGFSMNTMPLGFLNLGSGEKVVDEKWRKQQILELEVYSKRLELVQDEIKVALDELRSSTGTGVRGVQQQFNNVIFFCLEFSCRKNSECRGLLVKTGMIVIYSYTMPFSNVQPQKIICDYGVINCGFAESTGGIEINCGFAV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00492 471 MobiDBLite consensus disorder prediction 76 92 - -
Car04g00492 471 MobiDBLite consensus disorder prediction 19 42 - -
Car04g00492 471 MobiDBLite consensus disorder prediction 226 244 - -
Car04g00492 471 Coils Coil 135 162 - -
Car04g00492 471 MobiDBLite consensus disorder prediction 69 92 - -
Car04g00492 471 MobiDBLite consensus disorder prediction 19 54 - -
Car04g00492 471 MobiDBLite consensus disorder prediction 201 219 - -
Car04g00492 471 PANTHER BNAANNG10740D PROTEIN 1 389 - -
Car04g00492 471 MobiDBLite consensus disorder prediction 191 284 - -
Car04g00492 471 Coils Coil 364 384 - -
Car04g00492 471 PANTHER BNAANNG10740D PROTEIN-RELATED 1 389 IPR007592 GO:0006355
Car04g00492 471 Pfam Protein of unknown function, DUF573 95 188 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00492 Car-Chr4 4994399 4996036 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00492 26 392 GeBP Transcription Factor Family AT5G28040 43.627 8.94e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Car04g00492 DUF573 6.3e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00492 - - cam:101492301 694.501