Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00486 ATGAATGGAGTGACACAGTTTGAACAAGGTGACTCTGAGTTTGTTGAAGTTGATCTAACTGGTAGatatggaagaTACAATGAAATCCTTGGTAAAGGAGCTTCAAAGACAGTATATAGAGCATTTGATGTGTATCAAGGGATTGAAGTTGCTTGGAATCAGGTCAAGCTTTATGATTTCCTTCAAAGTCCTGAAGATCTTGAGAGGCTTTACTGTGAAATTCATCTCTTGAAAACATTGAAGCACAAAAACATTATGAAATTTTACACCTCTTGGGTTGATACTGCTAATAGGAACATTAACTTTGTCACTGAAATGTTCACCTCTGGTACACTTAGACAGTATAGGCTAAAGCACAAGAGAGTTAACATCAGAGCAGTGAAGCATTGGTGCATACAGATCCTGAGAGGACTTCTCTACCTACATAGTCATGACCCACCAGTGATCCATAGAGATCTCAAATGTGACAACATTTTTGTCAATGGAAATCAAGGTGAAGTCAAAATTGGGGATCTTGGCCTTGCAGCAATTCTTCGGAAATCACATGCTGCTCATTGTGTAGGAACGCCTGAATTCATGGCGCCAGAAGTTTATGAAGAGGCATACAATGAACTAGTTGACATATATTCCTTTGGGATGTGCATATTAGAGATGGTCACATTTGAATATCCTTATAGTGAATGTACTCATCCAGCTCAAATCTACAAGAAAGTTATTTCAGGGAAAAAGCCAGACGCTTTGTATAAAGTTAAGGATCCAGAAGTGCGACAATTTGTCGAGAAATGCTTGGCCACAGTGTCCGAAAGGCTTTCTGCGAGGGAGCTTCTAGATGACCCTTTTCTTCAAATTGATGATTACGAATATGATTTGAGACAGGTAATCAGTGGAGAATTGAATGACTTCGGTCCCCTCATCAGACAACCGCTTTATGATCTTCATCGAAGCTATAGTAATTTCAGTTACGAATACTCGAATGGTGGCTTTGGGTATGAAGGAGACTGGTATTCTCATCCAGCTGATAATGAACAGTGTGGAATTGAACTTTTTGAGCACCATGATGATGAACCCTCTGAACATGTTGACATAAGTATCAAGGGCAAGAAGAAAGATGACGGTGGTATCTTTTTGAGAATAAACATTTCTGATAAAGAAGGCCGCGTTCGTAATATTTCTTTCCCATTTGACATAGAGATGGACACAGCAATAAGTGTAGCAACTGAGATGGTTGCAGAACTTGACATTACTGATCAAGATGTTACCAGCATAGCAGAAATGATCGATGGAGAAATCGCTTCCTTGGTACCTGAATGGAGAACAGGACCAGGAATCGTCGAAACTCCTCGTTTTTCAAGTCAAGGTTTCTGTCGCAATTGCGTGTCTAATCATACTTCTAGTGGCTCCCTTTTGGATTTTCTTTCACATAATCAGAGTAACTTGCAACTTCCCGAGTGTTGTAGGCATGGATGCGCTTCAATGCATGGGCGGTTTGAAGAGATTACCTTCCAATCTGAGGAATATGACAATCATATTCGAGAGATTCCGAACATTTCAAACCAATCAGACCACTTGCTTTATCAAAGGCAATGGAATCAGCATGAAAGTCGAGAACTGAGTCCGGTAGATTCAGATCAAAGTCATTCTGATGAACAAAATGAACAATTAGATAAATCAGTATTAGCTGAAGATAAAGCACATGATGTTTGGGAAAATAAGTTTCCCCACAATGCAACAATTTCGCCAAAAAATTCATCTGGAACCCATGATTTTTCCGCCATTCGTTCGTTATATTGCGGTCTTGACGATGATTATGAGAAAGATATCCAAAAGGAACTGAGATGGTTGAAAGCAAGGTACCAAATGGAGTTAAGGGAACTTAAGGATCAACAGCTTGGGCTAACAACTAAATCTTCTCGTAGCGGTAATGGAAAGCACAAAACAAATTACGTGGTTATGTCATCTTCATCGACAGAAAGATTCAAAGGAGGCAACAATGACATTCACTCGAAACATGTTACTAATAACTTGAGTTATGATTTCGGTCATGTTCATAAAAGCAGCCCCATTTCGGACACCCAAAGGGACGAAAATTGTGAGGCGGCGGAATCCCTCGGAGAAGGTATGGTTACTGCAAAGAGTTTTTACAGTGGCTCCTTGCTTCCACACTCTCTGCACAGGACAGTTTCCCTCCCTGTTGATGCTTTTGATGTATAA 2211 0.3998 MNGVTQFEQGDSEFVEVDLTGRYGRYNEILGKGASKTVYRAFDVYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCIQILRGLLYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSERLSARELLDDPFLQIDDYEYDLRQVISGELNDFGPLIRQPLYDLHRSYSNFSYEYSNGGFGYEGDWYSHPADNEQCGIELFEHHDDEPSEHVDISIKGKKKDDGGIFLRINISDKEGRVRNISFPFDIEMDTAISVATEMVAELDITDQDVTSIAEMIDGEIASLVPEWRTGPGIVETPRFSSQGFCRNCVSNHTSSGSLLDFLSHNQSNLQLPECCRHGCASMHGRFEEITFQSEEYDNHIREIPNISNQSDHLLYQRQWNQHESRELSPVDSDQSHSDEQNEQLDKSVLAEDKAHDVWENKFPHNATISPKNSSGTHDFSAIRSLYCGLDDDYEKDIQKELRWLKARYQMELRELKDQQLGLTTKSSRSGNGKHKTNYVVMSSSSTERFKGGNNDIHSKHVTNNLSYDFGHVHKSSPISDTQRDENCEAAESLGEGMVTAKSFYSGSLLPHSLHRTVSLPVDAFDV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00486 736 Gene3D - 346 439 - -
Car04g00486 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Car04g00486 736 CDD STKc_WNK 22 281 - -
Car04g00486 736 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Car04g00486 736 Coils Coil 608 628 - -
Car04g00486 736 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00486 736 MobiDBLite consensus disorder prediction 534 554 - -
Car04g00486 736 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00486 736 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 726 - -
Car04g00486 736 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00486 736 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 386 429 IPR024678 GO:0004674|GO:0005524
Car04g00486 736 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Car04g00486 736 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Car04g00486 736 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 1 726 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00486 Car-Chr4 4974848 4978658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00486 1 535 MAP Kinase Kinase Kinase AT3G22420 55.190 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car04g00486 Pkinase 6.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00486 K08867 - gmx:100775959 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03036 03 75367724 75373056 Car04g00486 04 4974848 4978658 PCT