Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00480 ATGGCTGATTCTTCAACCATCCCAAACGACTCTAAAACACGTCCTTATCATCCCTACCAGCACCTCAACATTCCCATCGACAAACTCTACAACCTCCCCACCTCACCGGAGCATCTTTTCCACGAAGAAATCAGAAAGCGCCGTTCTTGGGGCGACAATCTTCAATACTACACCGGCACCGGCTACCTCTCCGGCGCGATCATCGGAGGCACCAAGGGAACCATTGAAGGCATCAAGGCTGCCGAATCCGGTGAATCTCTTAAGCTCCGGGTTAACCGAGTTCTTAATTCGGGTGGTCAGGGAGGTAGAAGACTCGGTAACTCGCTTGGCGTGTTAGGTTTGATCTTTGCGGGGTTGGAGAGTGCTATGATTCATGTTAGGGACACGGATGATTTTGTTAATAGTGCTGTCGCCGGACTTGGGACCGGAGCGCTTTACAAGGCTGCGGCGGGACCTCGGTCGGCTGCTATTGCCGGTGCTGTTGGCGGGATTACGGCAGCTGTGGTAGTTGCTGGAAAGCAAGCTTTGAAACGATACATTCCTATATAA 549 0.5209 MADSSTIPNDSKTRPYHPYQHLNIPIDKLYNLPTSPEHLFHEEIRKRRSWGDNLQYYTGTGYLSGAIIGGTKGTIEGIKAAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLESAMIHVRDTDDFVNSAVAGLGTGALYKAAAGPRSAAIAGAVGGITAAVVVAGKQALKRYIPI 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00480 182 PANTHER TIM23 3 182 IPR045238 GO:0022857
Car04g00480 182 Pfam Tim17/Tim22/Tim23/Pmp24 family 56 165 - -
Car04g00480 182 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23-3 3 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00480 Car-Chr4 4930960 4932023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00480 4 178 Chloroplast and Mitochondria Gene Families AT1G17530 57.303 1.92e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00480 K17794 - gmx:100803835 246.899