Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00473 ATGGATAGGGTATTCTCAGTGGACGAAATTCCCGACCACTTATGGTCGCCGCAGATTCACATCTCCGCCGGCGCCGACGACTCCTCTAACTCTAAGATGAGCCGCAGCGCTTCCGAGTGGGCTTTCCAACGCTTCATCCAAGAAACTTCTGCTACCTCTCCCCTTTCTTCTTCCTCCGTCGCTGACGACGTCGTATTCGTCGATATTGACCCTCGATCCAAACAAAACAACATCGAAGCTTCGCCACTTCCCACGGACGCCGCCGTTTTGACTAATGGACCTCCTCCGGTGGCTGTTGACTCCGATGAATACCGAGCTTTCCTAAAGAGTAAGCTAAATCTCGCGTGTGCTGCGGTTGCCATGACTAGGGGAACTTTGACTAAATCTCAAGATACAACCACTTTTCCTGAGAATGGACCACAGCCGTCTATTCCTACTCAAGTTGCATCTCAGCCCATTTTTGAAGTATCCGCCCCTTCAAATGACCCACCTATATTACAAGATAAAGATGCCAAACTACAACAACCTGGGATTCCTTCCATACCTCCTGTACAGAAAAAAACCATTGTTGCAATTAGGCCATCGACAAGTGGATCATCAAGAGAACTGTCAGATGACGACGAAGCCGAGGGAGAGACAGATATGAATGACAACACAGACCCTGCTGATGTAAAACGAGTAAGGAGGATGCTTTCCAATAGGGAGTCAGCAAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACAGAACTGGAAACACAGGTTTCTCAATTAAGAGGTGAAAATTCTACCTTGGTAAAGCGCCTTACTGATGTGAACCAAAAATACACTGAATCAGCTGTTGACAACAGAGTACTGAAAGCTGATGTAGAAACATTACGAGCAAAGGTGAAGATGGCTGAAGAGACAGTCAAAAGAATTACTGGGTTGAACCCAATGTTTCATGCCATGACTGATATATCATCAATGGGCATGCCATCATTTGATGGGAGCCCTTCAGACACTTCGGCTGATGCTGCTGTTCCGGTGCAAGACGAGCCGCATCATCACTTCTATCAACCCGCGTCCAATAATTCCATGCCCTGTCATGATATGGGAGTCAACAATGGTTTGGGTGACATTTCTTCAATTGAAAATGTGCAGCAGCAGCAGAACAATGCAGCAGTTGTAGGTGGGAGCAAGATGGGTCAAACAGCTTCTCCCTTGCACCGGGTGGCTAGCTTGGAGCATCTTCAGAAACGGATTCGTGGTGGTGTGGATTCTTGTGGACCGCCTTCTAATGGAGAGCAGTAA 1293 0.4741 MDRVFSVDEIPDHLWSPQIHISAGADDSSNSKMSRSASEWAFQRFIQETSATSPLSSSSVADDVVFVDIDPRSKQNNIEASPLPTDAAVLTNGPPPVAVDSDEYRAFLKSKLNLACAAVAMTRGTLTKSQDTTTFPENGPQPSIPTQVASQPIFEVSAPSNDPPILQDKDAKLQQPGIPSIPPVQKKTIVAIRPSTSGSSRELSDDDEAEGETDMNDNTDPADVKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSTLVKRLTDVNQKYTESAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFHAMTDISSMGMPSFDGSPSDTSADAAVPVQDEPHHHFYQPASNNSMPCHDMGVNNGLGDISSIENVQQQQNNAAVVGGSKMGQTASPLHRVASLEHLQKRIRGGVDSCGPPSNGEQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00473 430 Pfam bZIP transcription factor 224 276 IPR004827 GO:0003700|GO:0006355
Car04g00473 430 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 228 243 IPR004827 GO:0003700|GO:0006355
Car04g00473 430 Coils Coil 283 303 - -
Car04g00473 430 SUPERFAMILY Leucine zipper domain 225 276 IPR046347 GO:0003700|GO:0006355
Car04g00473 430 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 223 275 IPR004827 GO:0003700|GO:0006355
Car04g00473 430 PANTHER BZIP TRANSCRIPTION FACTOR 1 411 - -
Car04g00473 430 Coils Coil 234 268 - -
Car04g00473 430 PANTHER BASIC LEUCINE ZIPPER 63 1 411 - -
Car04g00473 430 Pfam Basic leucine-zipper C terminal 292 419 IPR020983 -
Car04g00473 430 SMART brlzneu 221 285 IPR004827 GO:0003700|GO:0006355
Car04g00473 430 MobiDBLite consensus disorder prediction 155 224 - -
Car04g00473 430 CDD bZIP_plant_GBF1 226 276 IPR045314 GO:0003700|GO:0006355
Car04g00473 430 Gene3D - 224 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00473 Car-Chr4 4857165 4861420 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00473 1 367 bZIP Transcription Factor Family AT4G02640 38.404 1.37e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car04g00473 bZIP_C 9e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00473 K25784 - gmx:100170702 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g03053 03 75493875 75497303 Car04g00473 04 4857165 4861420 PCT