Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00464 ATGCAAAAGAGTATATGTCTGTTGCTTATTATCTATATACCAATTTTGTTGAATACAAAAAGCATCAATGGTGAATCATTGACATTAGGATGTGGATTAAGTGAAAGTGGTGGCAAAGATGCTGATGGAAGACAATGGAATCAAGATAACAAATATTTTTCAGGTGGAAATTCCATTACATCAAAAGCTTCATTTCAAGATCCTTCTCTTTTATCAGAAATTCCATACATGACAGCACGTATTTTCACATCTGAATCAACCTATAAATTCCCAATTGAACCTGATAAACGTTATTGGTTAAGACTCCATTTTTATCCATCTGTTTACAACACTTTCAACCCTTCAGATTCATTTTTCTCTGTCACAGCAAATGATGTTACTCTCCTTAACAATTTCAGCTCTTCAATTACATGTCAAGCTCTCTCACAAGCTTATCTTGATAGAGAATATTCTCTTGCACCTTTGAATTCAGATACTCTTACTCTTACCTTTAAGCCTAATTCTAATGGTGGTGCTTTTGCTTTTATAAATGGTATTGAACTTATTCAAATGCCTGATTTGTTGTTTGATTCACCTTCATTGGTTGGTTATGCTGACCAAACTGTGGATGCAAAAAGTTTGCATTTTCAAACAATGTTTAGATTGAATGTTGGTGGACAATTTATATCTCCTGTTCAAGATTCTAATTTGAGTAGAATGTGGTATGATGATACACCTTACCTTTATGGTGCAGCAACTGGTGTTACAACCCAAGCTTCTAAGAATGTTAAAATTGACTACCAAACATTGCCTCAATACATTGCTCCTAGTAATGTTTATTCAACATCAAGATCAATGGGAACTGATAAGGATGTTAACATGGGTTACAATCTTACTTGGATTTTTCAAGTTGATCCAAATTCAATGTATCTAACAAGGTTGCATTTTTGTGATTACTATTATTCCAAAGTTAATGAAATTGTTTTCAAGATTTTTGTTAATAATCAAACGGCTGAGAATGAAGCTGATGTGATTGGTTGGACAGCAGGTAAAGGAGTTCCAACTTATAAAGATTATGTGATTTATGTTCATGATGAGCCAGGTGATGATCAACTTTGGCTTGCATTGCATCCATCAACTGATACAAAGCCAGAATACTATGATGCTATAATAAATGGTATTGAGATATTTAAACTTAATGACACCAATTTGTCTGGACCGAATCCTCAGCTTTCTGATATGATGATTGAGCATCAAGAAAAGGAAAGAACTTTCCATGACAACAAACATGATCATAACAAGAGTTTTGCTATTGGTGGAGCTGCTGGTGGTGCTGCTGGTTTTGCATTAGTAGCTGCAATATGTGTTGCTGTCCATCAAAGGAAGAAGAAAACTCCTGGATCATATACAAATACATCAAGTTGGTTGCCTATTTATGGAAATTCACACACAACAGGAACCAAATCAGGAGGATCAGGAAAAAGTAGTAGTGGTAACATAGCCATGGCTCAAGGATTGTGTCGTTATTTCTCTTTACAAGAAATGAAGCATGCATGCAATAACTTTGATGAGTCTAATGTGATTGGGGTAGGAGGGTTTGGAAAAGTTTACAAAGGTGTTATTGATAATGGTTTTAAAGTGGCTATTAAGAGATCAAATCCACAGTCAGAACAAGGAGTGAATGAATTTCAAACTGAAATTGAAATGCTTTCAAAGCTTAGACACAAGCATTTGGTTTCTTtgattggtttttgtgaggaagatgtttactcgttcggagtaattctattcgagGCACTTTGTTCAAGGCCTGCTTTGAATCCTAATCTTCCAAAAGAACAAGTTAGTCTTGCGGATTGGGTTTTGCTCAACAAAAGAAAAGGAACACTTCAAGATATTATTGATCCAAATCTCAAAGGAAAGATCAAACCTGAAAGCTTGAACAAGTTTGCAGACGCAGCCGAAAAGTGTTTGTCTGATCACGGACTCGATCGACCCTCCATGAATGATCTATTGTGGAATCTTGAATTTGCTCTTAACCTACAAGAAAAACATGATGGTTCAAGTTCAAAACAACATTCTCCACATGCAGATCATGAAAGTGAGTTTGAAGAAGTGACCTTGCCACACAATCACATGGCTGCACATTACAAAAACCTTAGCCTTGGAACTGAACATGACCTTAGTCATGACTCAAGTGAAAATTCAACTGCCATTTTCTCTCAAATTGTCAATCCCAAAGGCCGATGA 2229 0.349 MQKSICLLLIIYIPILLNTKSINGESLTLGCGLSESGGKDADGRQWNQDNKYFSGGNSITSKASFQDPSLLSEIPYMTARIFTSESTYKFPIEPDKRYWLRLHFYPSVYNTFNPSDSFFSVTANDVTLLNNFSSSITCQALSQAYLDREYSLAPLNSDTLTLTFKPNSNGGAFAFINGIELIQMPDLLFDSPSLVGYADQTVDAKSLHFQTMFRLNVGGQFISPVQDSNLSRMWYDDTPYLYGAATGVTTQASKNVKIDYQTLPQYIAPSNVYSTSRSMGTDKDVNMGYNLTWIFQVDPNSMYLTRLHFCDYYYSKVNEIVFKIFVNNQTAENEADVIGWTAGKGVPTYKDYVIYVHDEPGDDQLWLALHPSTDTKPEYYDAIINGIEIFKLNDTNLSGPNPQLSDMMIEHQEKERTFHDNKHDHNKSFAIGGAAGGAAGFALVAAICVAVHQRKKKTPGSYTNTSSWLPIYGNSHTTGTKSGGSGKSSSGNIAMAQGLCRYFSLQEMKHACNNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDVYSFGVILFEALCSRPALNPNLPKEQVSLADWVLLNKRKGTLQDIIDPNLKGKIKPESLNKFADAAEKCLSDHGLDRPSMNDLLWNLEFALNLQEKHDGSSSKQHSPHADHESEFEEVTLPHNHMAAHYKNLSLGTEHDLSHDSSENSTAIFSQIVNPKGR 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00464 742 Gene3D Transferase(Phosphotransferase) domain 1 584 707 - -
Car04g00464 742 SUPERFAMILY Protein kinase-like (PK-like) 500 666 IPR011009 -
Car04g00464 742 ProSitePatterns Protein kinases ATP-binding region signature. 521 543 IPR017441 GO:0005524
Car04g00464 742 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 581 729 - -
Car04g00464 742 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 21 581 - -
Car04g00464 742 MobiDBLite consensus disorder prediction 677 696 - -
Car04g00464 742 Gene3D Phosphorylase Kinase; domain 1 478 583 - -
Car04g00464 742 MobiDBLite consensus disorder prediction 679 696 - -
Car04g00464 742 MobiDBLite consensus disorder prediction 718 742 - -
Car04g00464 742 PANTHER OS07G0166700 PROTEIN 581 729 IPR045272 GO:0004714|GO:0006468
Car04g00464 742 PANTHER OS07G0166700 PROTEIN 21 581 IPR045272 GO:0004714|GO:0006468
Car04g00464 742 Pfam Malectin-like domain 30 391 IPR024788 -
Car04g00464 742 Gene3D - 27 185 - -
Car04g00464 742 Gene3D - 207 393 - -
Car04g00464 742 ProSiteProfiles Protein kinase domain profile. 515 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00464 742 Pfam Protein kinase domain 516 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00464 Car-Chr4 4797312 4799897 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00464 579 742 Receptor kinase-like Gene Family AT3G51550 46.995 9.32e-40 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car04g00464 Malectin_like 1.7e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00464 - - gmx:100815737 910.212