Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00456 ATGGGGACTCCAGTGAATATTATTGTGGGTTCTCATGTCTGGATTGAAGACCCAGAGGTAGCTTGGATTGATGGACAGGTATCAGATATCAATGGAAACGATGCTGAAATTGTAACTACAAATGGGAAAAAGGTTGTTGCAAATTTATCAAAAATCTTTCCTAAGGATATGGAAGCTCCTCCTGGTGGAGTGGATGATATGACTAAACTGTCCTATTTGCATGAGCCTGGAGTCCTGCAAAATTTAAAAGTTAGATATGAATTGAATAAAATATATACATATACCGGAAATATTCTGATTGCGATAAATCCATTCAAAAGTCTGCCTCATATTTATGGTGCACACATGATGGAACGATACAAGGCAGTGCCCGTAGGAGAGTTAAGCCCTCATGTATTTGCAGTAGCTGATGCTGCATATCGGGAAATGGTTATTGAAGGGAAAAACAATTCAATTCTGGTGAGTGGAGAAAGTGGAGCTGGTAAAACCGAAACTACAAAAATGCTTATGCAATTCCTAGCTTTCGTAGGTGGTAGAGTTGCTACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTGGAAGCATTCGGTAATGCTAAAACTATCAGGAATAACAATTCCAGTCGTTTTGGTAAATTTATTGAGATCCAATTTGATAAGAGTGGAAGAATCTCAGGAGCAGCCATCCGAACATACCTTCTTGAGAGATCTCGGGTTTGTCAAGTTAATGATCCTGAACGAAACTACCACTGCTTTTATCTTCTCTGTGCTGCACCACAGGAGGAAATTGAGAAATACAAATTAGGAAATCCTAAATCATTTCACTACCTTAACCAGTCAAAATGCTATGAGCTGGCTGATCTAAACGATGCTCAAGAGTATCTTGCCACCCGTAGAGCTATGGATATTGTTGGAATAAGTCAAACAGATCAGGAAGCCATTTTCAGAGTTGTTGCTGCAATTCTTCATCTTGGTAATATTGATTTTGCCAAAGGAAAGGAAATTGACTCATCAGTTCCAAAAGATGACAAAGCCAAATTCCACCTGAAAATAGCTGCCGAGCTTCTGATGTGTGATGCTGATGCCTTGGAAGATGCATTATGCAAACGTGTTATGATCACCCCTGAAGAAGTTATAAAACGGAGCCTTGACCCACAAAGTGCAACGGTCAGTAGAGATGGACTGGCAAAAACAATTTATTCTCGGCTATTTGATTGGCTGGTGGACAAGATTAATAATTCAATTGGACAAGACCCCAATTCTAAATGTTTGATTGGGGTCCTTGATATCTATGGTTTTGAAAGCTTTAAATTAAACAGTTTTGAGCAGTTCTGCATTAATTTCACAAATGAAAAGTTGCAGCAACATTTCAATCAGCACCTGTTCAAAATGGAACAAGAAGAATATACAAAGGAGCAGATCAATTGGAGCTACATTGAATTTGTAGACAACCAAGATGTTCTGGACCTTATTGAAAAGAAGCCTGGAGGAATTGTTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACATTTGCAAACAAGTTATATCAAACATTTAAGAATCACAAGCGCTTTATTAAGCCAAAATTGTCTCAAACAGATTTCACCATTGCTCATTATGCTGGAGAGGTGACATACCAATCTGACCAATTTTTAGACAAAAACAAGGATTACGTGGTTCCTGAACATCAAGATTTATTGATTGCTTCCAAATGTCCCTTTATATCTGACCTTTTTCCACCCCTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATAGGTTCTCGTTTTAAGCTGCAACTACAGCAACTAATGGAAACATTAAGTTCTACAAAACCCCATTACATTAGATGTGTGAAACCAAACAACCTCCTCAAGCCTGCAATTTTCGAAAATGTCAACATTATGCATCAACTCCGCTGTGGTGGTGTGCTGGAGGCTATCAGAATCTCTTGTGCTGGCTACCCTACACGCTGCCCTTTGTTTGAATTTGTAAACAGATTTGGCCTCCTTGCCCCAGAGGCCATGGGAGCACACTGTATTGAAAAGAATGCTTGCCAAAAGATTCTGGAAAAGATGGGGCTTAAAGGATATAGGATTGGAAAAACAAAGGTATTCTTGAGAGCAGGTCAGATGGCTGAACTAGATGCTCGGAGAGCTCAAGTACTTGGTAGTGCAGCAAAAGTTATCCAACGGCGCATACGAACCCATCAAATTCGGAAATATTATCTTGCATTGCAAAAGAAGACCATATATGTGCAGTCTCGGTGGAGAGGAAGACTTGTATTCAAACGCTATGAGAAAATGAAAAGGGAGGCCGTTGCTGCTGCTGTGAAAATTCAAAAGAATATACGCAGATATGAAGCTAGGAAGGCTTATAAAGAACTTCATAGGTCAGTACTTATATTGCAATCAGCTTTAAGGGCCATTGCTGCTCACAAGGAGTTGAGATTTGGGATACGAACCAAAGCTTCCGTCATTATTCAGGCTCGGTGGCGGTGCCACAAAATGGCCTTACATTATAAGAGGCTCAAAGAAGGTTCAATAGTTACACAATCTAGATGGAGAAGGTGTTTAGCCAGGGAAGAGCTCAAGAAACTGAAAATGGCTGCAAGAAAAACTGGAGCACTTCAAGAAGCAAAGACGAAACTTGAAAAACAAGTGGAGGAACTCACTTGGCGTCTCCAACAAGAAAAATGTTTAAGGGCTGCAGGAGATACCGACGCTCTTCAAGAAGCAAAAAATAAGCTTGAAAAACGAGTGGAGGAACTCATTTGGCGTCTCCAACTAGAAAAAGGTTTAAGGACCAATCTAGCGGAATTCAAAGCAATGGAGATAGCAAAACTGCAGAACTCATTGCAGGAGATGAAGAGAAAAGTTGACGAAACTAATGTTCTGCTCCTCAAGGAGCGAGAGAATGCAAAGAAAGCTATTGAAGCAGCATCTTCTGTTATTAAAGAAACGAAGGTTCTTGTTGATGATAAAGAGAATATTAACACACTAAGAATGGAAGTCGAGAGCCTAAAGACTTCACTCAAGTTGGAAAAACAGAAAGCCAAAGAGTTTGAAAGAAAATATAACGAAGCTAAAATTTGTAGTGAAGAAAGAGGTAAAAGGTTAGAAGACACGGAGAAGAAGCTTCGTCAGCTCCAAGAATCAATGACTAGGTTTACTTCTCAGAAGACCTTATAG 3228 0.3959 MGTPVNIIVGSHVWIEDPEVAWIDGQVSDINGNDAEIVTTNGKKVVANLSKIFPKDMEAPPGGVDDMTKLSYLHEPGVLQNLKVRYELNKIYTYTGNILIAINPFKSLPHIYGAHMMERYKAVPVGELSPHVFAVADAAYREMVIEGKNNSILVSGESGAGKTETTKMLMQFLAFVGGRVATEGRTVEQQVLESNPVLEAFGNAKTIRNNNSSRFGKFIEIQFDKSGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEIEKYKLGNPKSFHYLNQSKCYELADLNDAQEYLATRRAMDIVGISQTDQEAIFRVVAAILHLGNIDFAKGKEIDSSVPKDDKAKFHLKIAAELLMCDADALEDALCKRVMITPEEVIKRSLDPQSATVSRDGLAKTIYSRLFDWLVDKINNSIGQDPNSKCLIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHLFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSQTDFTIAHYAGEVTYQSDQFLDKNKDYVVPEHQDLLIASKCPFISDLFPPLPEETSKSSKFSSIGSRFKLQLQQLMETLSSTKPHYIRCVKPNNLLKPAIFENVNIMHQLRCGGVLEAIRISCAGYPTRCPLFEFVNRFGLLAPEAMGAHCIEKNACQKILEKMGLKGYRIGKTKVFLRAGQMAELDARRAQVLGSAAKVIQRRIRTHQIRKYYLALQKKTIYVQSRWRGRLVFKRYEKMKREAVAAAVKIQKNIRRYEARKAYKELHRSVLILQSALRAIAAHKELRFGIRTKASVIIQARWRCHKMALHYKRLKEGSIVTQSRWRRCLAREELKKLKMAARKTGALQEAKTKLEKQVEELTWRLQQEKCLRAAGDTDALQEAKNKLEKRVEELIWRLQLEKGLRTNLAEFKAMEIAKLQNSLQEMKRKVDETNVLLLKERENAKKAIEAASSVIKETKVLVDDKENINTLRMEVESLKTSLKLEKQKAKEFERKYNEAKICSEERGKRLEDTEKKLRQLQESMTRFTSQKTL 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00456 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 786 IPR027417 -
Car04g00456 1075 CDD MYSc_Myo11 76 720 IPR036018 -
Car04g00456 1075 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 Coils Coil 1045 1072 - -
Car04g00456 1075 Coils Coil 1010 1037 - -
Car04g00456 1075 SMART MYSc_2a 57 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 Coils Coil 882 913 - -
Car04g00456 1075 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Car04g00456 1075 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 Gene3D - 735 786 - -
Car04g00456 1075 Gene3D - 833 884 - -
Car04g00456 1075 Gene3D - 787 832 - -
Car04g00456 1075 Gene3D - 439 623 - -
Car04g00456 1075 SMART iq_5 784 806 IPR000048 GO:0005515
Car04g00456 1075 SMART iq_5 832 854 IPR000048 GO:0005515
Car04g00456 1075 SMART iq_5 855 877 IPR000048 GO:0005515
Car04g00456 1075 SMART iq_5 807 829 IPR000048 GO:0005515
Car04g00456 1075 SMART iq_5 734 756 IPR000048 GO:0005515
Car04g00456 1075 SMART iq_5 757 779 IPR000048 GO:0005515
Car04g00456 1075 Gene3D Kinesin motor domain 65 662 IPR036961 -
Car04g00456 1075 PANTHER MYOSIN-9 6 916 - -
Car04g00456 1075 PANTHER MYOSIN-9 916 1070 - -
Car04g00456 1075 Gene3D - 667 730 - -
Car04g00456 1075 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Car04g00456 1075 Pfam IQ calmodulin-binding motif 787 806 IPR000048 GO:0005515
Car04g00456 1075 Pfam IQ calmodulin-binding motif 834 854 IPR000048 GO:0005515
Car04g00456 1075 PANTHER MYOSIN 6 916 - -
Car04g00456 1075 PANTHER MYOSIN 916 1070 - -
Car04g00456 1075 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 Gene3D - 252 310 - -
Car04g00456 1075 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 787 885 IPR027417 -
Car04g00456 1075 Coils Coil 919 939 - -
Car04g00456 1075 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00456 1075 ProSiteProfiles IQ motif profile. 785 812 IPR000048 GO:0005515
Car04g00456 1075 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Car04g00456 1075 Coils Coil 782 802 - -
Car04g00456 1075 Coils Coil 951 985 - -
Car04g00456 1075 Pfam Myosin N-terminal SH3-like domain 9 51 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00456 Car-Chr4 4720387 4732674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00456 1 1069 Myosins gene family AT1G54560 74.181 0.0 1660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00456 K10357 - gmx:100816792 1749.56