Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00452 ATGCAAACTCATTGGTTGTTCTTGTATTGTTACATTGGTGTGTCTCTCTTTTTTATTGAGGGAGCTCAAATTGCAACATACAATGAATTGTCAACTCTTATCTCCATCAAATCTAGTATCATTGATCCAATGAATCATTTAAAGGATTGGCAGCAGCCGAGCAACGCGACGATGCAGGATGATGGTTGGAACCATTATTGTAACTGGACTGGAATTAGTTGCAACTCTAAAGGGTTTGTAGAGAGTCTTGAACTCTACAACATGAACTTAAGTGGTGTTATTACATACCACATTCAATCCCTTTCAAGTTTATCTTATTTCAACATAAGTTGTAACAACTTTGCTTCAACACTTCCCAAATCACTATCTAACCTCACATCTCTAAAGAGTTTTGATGTGAGCCAGAACTACTTTACTGGCAGATTTCCCACTGGTCTTGGAAGAGCTGCAGGGTTGAGATCAATCAATGGATCAAGCAATGAATTTTCAGGTCTTCTTCCTGAGGATATTGGAAACTCAACATTGCTTGAGAGCCTCGATTTTCGAGGGAGCTACTTTATAAGTCCAATTCCAAAGAGTTTTAAAAATTTGCAGAAACTTAAGTTTCTAGGCTTATCAGGCAATAACTTCACAGGAAAGATTCCAGAATATCTTGGAGAACTGAGTTCTTTAGATACATTGATTATGGGATACAATGAGTTTGAAGGTGAAATCCCTGCAGAGTTTGGAAACATGACTAATCTTCAATATCTTGATTTGGCTGTAGGAACTCTCAGTGGACAAATTCCAGTTGAATTCGGTAAGTTGAAGAACCTCACGACAGTTTACTTATATCGAAACAACTTGACAGGGAAAATTCCACCTGAGCTTGGCAACATTATGTCACTAGCATTTCTAGACCTCTCTGACAATCAAATCTCAGGAGAGATTCCAAAAGAACTTGCTAAATTAGAAAACCTTCAGCTTTTGAATTTGATGAGCAATAAACTAACTGGTTTTGTACCAGAGAAGCTTGGTGAATTGAAAAACTTACAGGTTCTTGAGCTATGGAAAAATTATTTAGAAGGTCCTTTGCCACTGAACCTTGGAAAATATTCACCTTTGCAGTGGTTAGATGTCTCTTCTAACTCATTGTCCGGTGAGATCCCTCCAGGTTTGTGTACTGAAGGAAATCTCATTAAACTAATCCTCTTCAACAATTCCTTCACCGGTCTCATTCCTAGTGGACTTTCGAACTGTTCGTCTTTGGTGCGTGTTCGGATTCAGAACAATCTAATTTCTGGAACCATTCCTGTTGGATTTGGCAATCTCCCTAGCCTTCAACGGCTTGAGTTGGCAAAGAACAACCTCACTGGAAAAATTCCTATTGATGTTACCTCTTCCACATCACTTTCCTTCATTGATGTATCCTGGAACCACCTTGATTCATCTCTGCCTTCAGAAATTCTTTCTATTCCAACCCTTCAAACCTTCATTGCCTCTCACAACAACCTTGGAGGAACTATCCCGGATGAGTTCCAGGGCTGTCCATCTCTTTCTGTGCTTGATCTTTCAAATGCAAATATCACTGGCACAATCCCAGAAAGTATAGCTTCTTGTCAAAGATTAGTCAACCTTAATCTTAGAAACAATCATTTGACAGGTGGAATCCCAAAATCAATCACAAACATGCCAACCTTATCTGTTCTTGACTTGTCCAACAATTCGCTGACCGGTAGGATACCTGAAAACTTTGGCAGCTCACCAGCTCTGGAAATGATGAATCTGTCCTATAACAAGCTGGAGGGGCCAGTACCCTCAAATGAGATTCCTCTGATGATGAATCCTAACGATCTTATCGGCAATGTGGGTCTTTGCGGAGGCATTCTCCCTCCATGTTCTCAGAGTTTGACTGTGACAAGTCAGAAAAGGAGCTCACACATTAAGCACGTTGTTATCGGTTTTGTGTCTGGCATTTCAGTGATTTTATCTTTTAGTGCTGTATATTTTGGAGGCAAATGGTTATGCAATAGATGGTATTTGTATAATAATTTCATCCATGATTGGTTCAGACATAGCGGTGAAGATTGGCCCTGGAGGTTTGTAGCATTCCAAAGGATCAGTTTCACAAGTAATGAGATACTGAGTTGCATAAAGGAATCAAATATCATAGGCATGGGTGGCAATGGTATTGTTTACAAAGCTGAAATCCATAAACCTCAGGTAACAGTAGCAGTGAAGAAACTGTGGAGATCAAGAGTAGACATAGAAAATGGGAATAATGATGTATTAAGGGAAGTGGAACTCCTAGGGAGATTAAGGCATAGGAACATTGTAAGGCTATTGGGGTATGTTCACAATGAAAGGGATGTGATCATGGTTTGCGAGTACATGCCGAACGGGAACCTTGGAACAGCACTGCATGGTGAACAATCTGCTAGGTTACttgtagattgggtctcaaggtataacattgctcttggagttgcacaaggattgaactacctgcaccatgattgtcatccaccggttattcatagggatattaagtctaataacatactccttgacgcgaatttggaggccaggatagcagatttcgggttggcaaggatGATGATTCAAAAGAATGAGACTGTTTCGATGGTGGCTGGATCTTATGGTTATATTGCACCAGAATATGGATACACTCTGAAGGTTGATGAGAAGATTGACATATACAGTTATGGAGTGGTACTTTTGGAGCTGCTAACAGGCAAAATGCCTTTAGACCATGCGTTTGGAGAATCAGTGGACATAGTCAAATGGATACAAAAGAAGAGAAACAATAAAGCCTTGTTAGAAGCACTAGATCCCACCATAGCTGGTCAGTGCAAACATGTTCAGGAAGAGATGCTTCTTGTGCTCCGAATTGCACTTCTATGTACTGCAAAGCTTCCCAAGGAAAGACCATCCATGAGAGACATCATTACAATGCTTGGAGAGGCGAAGCCTAGAAGGAAAAGCATTTGCAGTAACGGGAGACAAGAGAATAGCATGGAAAAGGGAACAATATTTACCACATCACCATTAGCAATTCTTTTTTAG 3066 0.3783 MQTHWLFLYCYIGVSLFFIEGAQIATYNELSTLISIKSSIIDPMNHLKDWQQPSNATMQDDGWNHYCNWTGISCNSKGFVESLELYNMNLSGVITYHIQSLSSLSYFNISCNNFASTLPKSLSNLTSLKSFDVSQNYFTGRFPTGLGRAAGLRSINGSSNEFSGLLPEDIGNSTLLESLDFRGSYFISPIPKSFKNLQKLKFLGLSGNNFTGKIPEYLGELSSLDTLIMGYNEFEGEIPAEFGNMTNLQYLDLAVGTLSGQIPVEFGKLKNLTTVYLYRNNLTGKIPPELGNIMSLAFLDLSDNQISGEIPKELAKLENLQLLNLMSNKLTGFVPEKLGELKNLQVLELWKNYLEGPLPLNLGKYSPLQWLDVSSNSLSGEIPPGLCTEGNLIKLILFNNSFTGLIPSGLSNCSSLVRVRIQNNLISGTIPVGFGNLPSLQRLELAKNNLTGKIPIDVTSSTSLSFIDVSWNHLDSSLPSEILSIPTLQTFIASHNNLGGTIPDEFQGCPSLSVLDLSNANITGTIPESIASCQRLVNLNLRNNHLTGGIPKSITNMPTLSVLDLSNNSLTGRIPENFGSSPALEMMNLSYNKLEGPVPSNEIPLMMNPNDLIGNVGLCGGILPPCSQSLTVTSQKRSSHIKHVVIGFVSGISVILSFSAVYFGGKWLCNRWYLYNNFIHDWFRHSGEDWPWRFVAFQRISFTSNEILSCIKESNIIGMGGNGIVYKAEIHKPQVTVAVKKLWRSRVDIENGNNDVLREVELLGRLRHRNIVRLLGYVHNERDVIMVCEYMPNGNLGTALHGEQSARLLVDWVSRYNIALGVAQGLNYLHHDCHPPVIHRDIKSNNILLDANLEARIADFGLARMMIQKNETVSMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGKMPLDHAFGESVDIVKWIQKKRNNKALLEALDPTIAGQCKHVQEEMLLVLRIALLCTAKLPKERPSMRDIITMLGEAKPRRKSICSNGRQENSMEKGTIFTTSPLAILF 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00452 1021 Gene3D Transferase(Phosphotransferase) domain 1 795 1011 - -
Car04g00452 1021 Gene3D Ribonuclease Inhibitor 28 150 IPR032675 -
Car04g00452 1021 Gene3D Ribonuclease Inhibitor 389 459 IPR032675 -
Car04g00452 1021 PRINTS Leucine-rich repeat signature 296 309 - -
Car04g00452 1021 PRINTS Leucine-rich repeat signature 557 570 - -
Car04g00452 1021 SMART serkin_6 711 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00452 1021 Gene3D Phosphorylase Kinase; domain 1 711 794 - -
Car04g00452 1021 PANTHER UNNAMED PRODUCT 9 1003 - -
Car04g00452 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Car04g00452 1021 Gene3D Ribonuclease Inhibitor 261 388 IPR032675 -
Car04g00452 1021 ProSitePatterns Protein kinases ATP-binding region signature. 717 741 IPR017441 GO:0005524
Car04g00452 1021 Gene3D Ribonuclease Inhibitor 153 260 IPR032675 -
Car04g00452 1021 SUPERFAMILY Protein kinase-like (PK-like) 703 986 IPR011009 -
Car04g00452 1021 Pfam Protein kinase domain 713 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00452 1021 SMART LRR_typ_2 197 221 IPR003591 -
Car04g00452 1021 SMART LRR_typ_2 557 581 IPR003591 -
Car04g00452 1021 SMART LRR_typ_2 101 125 IPR003591 -
Car04g00452 1021 SMART LRR_typ_2 437 461 IPR003591 -
Car04g00452 1021 SMART LRR_typ_2 317 341 IPR003591 -
Car04g00452 1021 SMART LRR_typ_2 269 293 IPR003591 -
Car04g00452 1021 Pfam Leucine rich repeat N-terminal domain 29 75 IPR013210 -
Car04g00452 1021 Pfam Leucine rich repeat 535 594 IPR001611 GO:0005515
Car04g00452 1021 Pfam Leucine rich repeat 415 474 IPR001611 GO:0005515
Car04g00452 1021 SUPERFAMILY L domain-like 62 330 - -
Car04g00452 1021 ProSiteProfiles Protein kinase domain profile. 711 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00452 1021 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXL1 9 1003 - -
Car04g00452 1021 Gene3D Ribonuclease Inhibitor 460 612 IPR032675 -
Car04g00452 1021 SUPERFAMILY RNI-like 259 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00452 Car-Chr4 4664968 4668371 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00452 6 997 Receptor kinase-like Gene Family AT1G08590 63.194 0.0 1255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Car04g00452 Pkinase 7.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00452 - - gmx:100793873 1653.26