Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00431 ATGGCGAACCGGTGGTGGACCGGACCGATTGGTCTAGGCGGGATGGACAACTCGGTGAACCCATCATCCCCACTCATAAAACCGGATCTGGGATTCTCCATGAATAACGAAAGTGCAATTACAGGTTTAaacaacaacaacaacaacaacGATGAAGATCAAGATGAGAAAGAAAACAGCGACGAACCAAAAGGAGGAGCAATCGATCAAACAAACACAAACTCCTCCACGCGCCGCCCAAGAGGCCGTCCATCAGGTTCAAAAAACAAACCTAAACCACCTATATTCATAACAAGAGACAGCCCTAACGCGCTTCGAAGCCACGTCATGGAAGTATCTACTGGATCCGACATCTCCGATTGCATCCTTCAGTTCGCTAGAAAAAGACAGAGAGGTATTTGCATTCTCAGCGCAACTGGAACTGTTCTTAATGTTTCACTCCGCCAGCCTACCACTCCCGGAGCTGTCGTTGTTCTTTCCGGTAGGTTCGATATTTTGTCCTTGACTGGTTCGGTGCTTCCCGGACCCTCGCCGCCTGGTGCTACTGGTTTGACTATTTACCTTTCTGGAGGTCAAGGACAGGTGGTTGGAGGTGGTGTGGTTGGCTCGCTTGTGGCTGCCGGACCTGTTATGTTAATGGCGGCTACGTTTTCGAATGCAACATATGAGAGGTTGCCGGTGGAAGAGAATGGTGAAGGTGATGATCAGGAAGGGCAGGGAGATGGTGGTGGTGGCGGTGAGTCTTCGCCGGTGGGGATGGGACAAGCGCAGGGTGGATCGGGCGGAGAAGGTTCTTCGGTGTATAATAATGTTAGTAGTAATTTGGGAGTTCAAAATGGACAACAACAAATGTTGAATCATGATGCTTATAATTCTCCTTGGGCTCATGGTCATGGTAGAACACCTTACTAA 912 0.4836 MANRWWTGPIGLGGMDNSVNPSSPLIKPDLGFSMNNESAITGLNNNNNNNDEDQDEKENSDEPKGGAIDQTNTNSSTRRPRGRPSGSKNKPKPPIFITRDSPNALRSHVMEVSTGSDISDCILQFARKRQRGICILSATGTVLNVSLRQPTTPGAVVVLSGRFDILSLTGSVLPGPSPPGATGLTIYLSGGQGQVVGGGVVGSLVAAGPVMLMAATFSNATYERLPVEENGEGDDQEGQGDGGGGGESSPVGMGQAQGGSGGEGSSVYNNVSSNLGVQNGQQQMLNHDAYNSPWAHGHGRTPY 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00431 303 MobiDBLite consensus disorder prediction 253 274 - -
Car04g00431 303 MobiDBLite consensus disorder prediction 34 49 - -
Car04g00431 303 ProSiteProfiles PPC domain profile profile. 102 238 IPR005175 -
Car04g00431 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 219 IPR005175 -
Car04g00431 303 MobiDBLite consensus disorder prediction 229 274 - -
Car04g00431 303 MobiDBLite consensus disorder prediction 1 102 - -
Car04g00431 303 MobiDBLite consensus disorder prediction 65 82 - -
Car04g00431 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 9 303 - -
Car04g00431 303 PIRSF ESCAROLA 27 303 IPR014476 GO:0003680
Car04g00431 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 303 IPR014476 GO:0003680
Car04g00431 303 Gene3D - 105 233 - -
Car04g00431 303 CDD DUF296 106 189 IPR005175 -
Car04g00431 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00431 Car-Chr4 4432440 4433952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00431 1 227 AT-hook Motif Nuclear Localized (AHL) Family AT3G04570 56.680 5.76e-79 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00431 - - gmx:100795097 324.324