Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00424 ATGGCTTCTCTCTCTTGCTCACCCACCGACCTCGCTCCATTCATCACCGCCACAGCAAACGCAACCGCCGCAGCTAACTACCTCTGCTCCCAATTCAATGCCATTTCAAATAAACTCAGCGACACCACCTATGCAGTGAACAACACGTACCTTCTTTTCTCAGCTTATTTAGTCTTCGCCATGCAGCTCGGCTTCGCCATGCTCTGCGCTGGCTCCGTTCGAGCCAAAAACACCATGAACATCATGCTCACCAACGTCCTTGATGCTGCCGCCGGTGGACTCTCCTACTATCTCTTCGGCTTCGCTTTCGCCTTTGGTGCACCCTCCAACGGCTTCATCGGCCGCCACTTTTTCGGTCTCAGGGATTACCCTGAACCGTCCAGAGACTATAGTTTCTTCCTCTACCAGTGGGCTTTCGCCATCGCGGCAGCCGGTATCGCCAGCGGCTCCATCGCCGAGAGAACTCAATTCGTTGCATATCTTATATATTCTTCTTTCTTGACCGGTTTTGTTTACCCCATTGTTTCGCATTGGTTCTGGTCTGATGATGGTTGGGCCAGCCCAACACGAACCGATGGTAATGTTTTGTTCGGGTCCGGCGTCATCGATTTCGCCGGTTCAGGTGTGGTTCACATGGTTGGTGGTATAGCAGGTTTATGGGGGGCTTTTATTGAAGGTCCAAGAATCGGCCGGTTCGACCGGTCGGGGAGGTCTGTTGCATTAAAAGGACACAGCGCGTCATTGGTTGTGTTGGGTTCATTTTTATTATGGTTCGGTTGGTACGGGTTCAATCCCGGTTCGTTTTTAACAATAGTGAAAGGCTATGGAAATGGTAAGAGAGGGGATTATTATGGTCAATGGAGTGCTATTGGAAGGACAGCTGTCACAACTACATTGGCTGGATGCACTGCTGCTCTCACAACTCTTTTTAGTAAACGGTTATTGGCTGGACATTGGAACGTGATTGACGTGTGTAACGGCCTCCTTGGCGGTTTCGCTGCAATCACTTCGGGCTGTTCTGTAGTGGAACCGTGGGCCGCGATTGTGTGTGGGTTTGTTGCGGCCTGGGTTTTAATTGGGCTTAACAAATTGGCGGTGAAAATGGAATATGATGATCCTTTGGAAGCGGCGCAGTTACACGGAGGGTGTGGCGCGTGGGGGGTTTTGTTTACGGGTTTGTTTGCGAAGGGAGAATACGTGAGCGAGATTTACGGGATTGGGAGGCCGTACGGGTTATTGATGGGCGGTGGAGGGAGATTAATTGCGGCGCAGGTGATTGAGGTATTGGTGGTGTGTGGGTGGGTGACGGTGACGATGGCGCCGTTGTTTTATGGGCTTCATAAGATGAAATTGTTGAGGATATCGAGGGATGAAGAGAGTATGGGGATGGATTTGACGAGACATGGTGGGTTTGCTTATGTGTATCACGATGAAGATGAAGATGAATCGATTAAGAGAGCAGGGTTTATGATGGGTAGGATTGAACCCGCGAGTTTGTCGCTATCTCCTTCCGCCGTGATTACACTCGAACAAGCTTCGCCGTCGCCAATCACTGCACTACCACCACCAGTGTGA 1575 0.5073 MASLSCSPTDLAPFITATANATAAANYLCSQFNAISNKLSDTTYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPEPSRDYSFFLYQWAFAIAAAGIASGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSDDGWASPTRTDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRSGRSVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKGYGNGKRGDYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGLNKLAVKMEYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVSEIYGIGRPYGLLMGGGGRLIAAQVIEVLVVCGWVTVTMAPLFYGLHKMKLLRISRDEESMGMDLTRHGGFAYVYHDEDEDESIKRAGFMMGRIEPASLSLSPSAVITLEQASPSPITALPPPV 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00424 524 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Car04g00424 524 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Car04g00424 524 SUPERFAMILY Ammonium transporter 44 454 - -
Car04g00424 524 TIGRFAM amt: ammonium transporter 47 473 IPR001905 GO:0008519|GO:0016020|GO:0072488
Car04g00424 524 PANTHER AMMONIUM TRANSPORTER 1 505 - -
Car04g00424 524 Pfam Ammonium Transporter Family 50 473 IPR024041 GO:0008519|GO:0016020|GO:0072488
Car04g00424 524 Gene3D Ammonium transporter AmtB like domains 24 490 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00424 Car-Chr4 4373937 4375511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00424 26 509 Inorganic Solute Cotransporters AT1G64780 80.287 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00424 K03320 K07573 gmx:100797209 832.017