Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00417 ATGAATTGCTTCCCGTGTTGTGGTCCCCAAAAAAATAAGAAAAGCAATAGTAAGAGAGAGCATGGTTCTACAACGCCACAAGAAACTACACCTGCATCAAAAGCACCTGATATGAAGAAACAAAAGGGAGATGAGCAACAAAACCAaggaggaggaggaggaggCGACCCAACAAATCTTAATGCACAAAATTTTACATTTCGTGAGCTAGCAACAGCAACAAAAAATTTCAGACAGGAATGTCTCCTAGGTGAAGGAGGCTTTGGAAGGGTCTACAAAGGGATCATTCCTACAACTGGACAgGTTGTGGCTGTGAAGCAACTCGATCGACATGGGACAGAAAACAGCAAGGAATTTTTGGCTGAAGTTGCATCGCTGAGCCATTTGCACCATGAAAATCTAGTCAATCTTATTGGTTATTGTGCTGATGGTGATCAACGTCTTTTGGTATATGAATACTTTCCTGCAGCTACTCTTGAAGACCGTCTTTTTGAGAATAAAACAGATCAACCACCATTAAACTGGTTTGAAAGAATGAGAGTAGCAGCAGGTGCTTCAAACGGACTAGAGTACTTGCATGACAGTGCCAACCCCCCAGTTATATACCGTGACTTGAAAGCATGCAACATTTTGTTGGATAATAATCTTAATGCAAAACTATATGATTTTGGAATGCATAGGCTTTCTGGTGGTGACAAGATGAACCATGCACCCCCAAGAGTTATGGGTACATATGGTTACTGTGCTCCTGAATATACAAGAACAGGTCAATTCTCCTCGAAGTCGGATGTATACAGTTTTGGAGTTGTCTTGCTTGAACTTATCACTGGACGACGTGCCATTGACACCACAAGACCTAACGAAGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTCAGGGATCCAAAAAGATATCCAGATATGGCAGATCCACTTTTGAATAAAAATTTCCCAGAAAAGGATCTGAATCAAATTGTTGCAATGGCATCCATGTGCTTACAAGAGGAACCAGATGCCCGTCCTTTGATCGGTGACGTTGTAACGGCTCTGAGTTTTCTTTCCACTGCTCCAACACAACCAATTCCACCTTCAATCCCCACAGCCACCTCTGTCTCTAAGCATAGTGTTGCCAGTGAAAGCGAAGCTGAAAGTGGAAGTGAGAGTGGAAGTGAGAGTGGAAGTGAATCAGAAGGAGAAAGTTCAGAAGATGAAGGTTCTCGCCATGAAGACAATGGAACTGCCCAAAATCATGTTGCAGTTGCAGTTAGTAAAAAACATAAAGAAAATGATGTCTCAGAAAATAATAAAAATACTAATAGCCATCCTCAACAAAAGTTGCCTTCGAAATCAAGCCGAAAAAGCAGCACAAAATCAAGGAATGAAACAATCAGTAAAGATTCAGCAGATGGAAGTGCATCTTCTAGTGGAAAAAGCAGTAGCAAAAAATGGCAAAGCTTTGTTGGTAATTTAAGCCAAAAGAAAAGCAGCAAAAAATCTTCTGTCAAAGAGTTAAGCCAAAAGAGCAGCAAAAAAAAATCAATCAAAGATGTAAGCAAGAAAAGCAGTAGAAAAACTTCTATCAGAGAGTTAAGCAATAAGGTTAGTGGAAAATCTTCTGCTCGAGTTTCGAGCCGCAAGGAATCTGAAGATGGAAGCATGATTTCGTCTCAAAGAAGTGCCTCATCAAGCCATTATACTAGCAGTGGTATGTCGGAGCGTAGCAGCAGCCGAGGAAGTGGGAGTGTTCACTCAGACATTAATGGTAGCAAAAGGACAAGCATGCGATTAGGCATGGAATCTGATGAGGGAAGCGATCGTCCTTTCGACCGCATGAGCAGCAGTGGATCGGATCGGTGA 1860 0.4113 MNCFPCCGPQKNKKSNSKREHGSTTPQETTPASKAPDMKKQKGDEQQNQGGGGGGDPTNLNAQNFTFRELATATKNFRQECLLGEGGFGRVYKGIIPTTGQVVAVKQLDRHGTENSKEFLAEVASLSHLHHENLVNLIGYCADGDQRLLVYEYFPAATLEDRLFENKTDQPPLNWFERMRVAAGASNGLEYLHDSANPPVIYRDLKACNILLDNNLNAKLYDFGMHRLSGGDKMNHAPPRVMGTYGYCAPEYTRTGQFSSKSDVYSFGVVLLELITGRRAIDTTRPNEEQNLVSWAQPLFRDPKRYPDMADPLLNKNFPEKDLNQIVAMASMCLQEEPDARPLIGDVVTALSFLSTAPTQPIPPSIPTATSVSKHSVASESEAESGSESGSESGSESEGESSEDEGSRHEDNGTAQNHVAVAVSKKHKENDVSENNKNTNSHPQQKLPSKSSRKSSTKSRNETISKDSADGSASSSGKSSSKKWQSFVGNLSQKKSSKKSSVKELSQKSSKKKSIKDVSKKSSRKTSIRELSNKVSGKSSARVSSRKESEDGSMISSQRSASSSHYTSSGMSERSSSRGSGSVHSDINGSKRTSMRLGMESDEGSDRPFDRMSSSGSDR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00417 619 ProSiteProfiles Protein kinase domain profile. 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00417 619 MobiDBLite consensus disorder prediction 497 513 - -
Car04g00417 619 SUPERFAMILY Protein kinase-like (PK-like) 63 378 IPR011009 -
Car04g00417 619 Gene3D Transferase(Phosphotransferase) domain 1 155 356 - -
Car04g00417 619 MobiDBLite consensus disorder prediction 466 496 - -
Car04g00417 619 MobiDBLite consensus disorder prediction 357 619 - -
Car04g00417 619 PANTHER OS07G0668900 PROTEIN 1 573 - -
Car04g00417 619 Gene3D Phosphorylase Kinase; domain 1 56 153 - -
Car04g00417 619 PANTHER RECEPTOR-LIKE KINASE LIP1 1 573 - -
Car04g00417 619 Pfam Protein kinase domain 79 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00417 619 MobiDBLite consensus disorder prediction 596 619 - -
Car04g00417 619 MobiDBLite consensus disorder prediction 554 595 - -
Car04g00417 619 MobiDBLite consensus disorder prediction 1 61 - -
Car04g00417 619 CDD STKc_IRAK 83 351 - -
Car04g00417 619 MobiDBLite consensus disorder prediction 436 454 - -
Car04g00417 619 SMART serkin_6 77 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00417 619 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Car04g00417 619 MobiDBLite consensus disorder prediction 45 61 - -
Car04g00417 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Car04g00417 619 MobiDBLite consensus disorder prediction 366 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00417 Car-Chr4 4288151 4291719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00417 1 401 Glycoside Hydrolase AT3G07070 58.554 7.42e-161 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Car04g00417 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00417 - - gmx:100804526 578.941