Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00394 ATGAAAGGGCGATCTAATCGCCCTCAAACTTCCGACCCTCCGCCGGACGAATGGGTCGACGGTTCATGGACGGTGGACTGCATCTGCGGCGTCACCTTCGACGACGGCGAAGAGATGGTCAAGTGCGACGAGTGCGATGTGTGGGTTCACACGCGCTGTTCTCGCTACGTTAAAGGAGATGACATGTTCGCTTGCGATAAATGCAAGAACAAGAACAACAACCGTGCCGGAACCGACAACAACACCGAGGAAACCGAAGTTGCTCAATTGCTTGTCGAGCTTCCCACAAAGACAATCTCAATGGAGAGAAAGAATAACAACAATAGAAGCAATTCTCTTTCGTCCAAAGTTGCTTCTTGTTCTCGTCGTCCTTTTAAGCTTTGGACTGATATACCTATGGAAGAGAGGGTTCATGTTCAGGGTATCCCCGGTGGTGATCCTTCTCTATTTGCAGGAAAAACAGTATCATCGATTTTCGGTCCACAGTTATGGAAATGCACTGGTTATGTTCCTAAGAAGTTTAATTTTCAGTATAGGGAATTTCCCTCTTGGTATGAGAGTGAAgataaggataatgatagtgatattaaggataaggataaTGGGGCTGGTGTTCTTTTATCGTTTTCGAAAGAGACTAATAGTGTTTTAGCTACATCCCCTGTTGCTGCTTTGGTTGATATGAGATCCAGCCAGGCTAAGAAGGATTTTAAGGAGACTCGAACCGGTAAGTTCGGTGGCGATCGTATGCCACGCGTCCACAATGCGGTTAAAAAAGAGAGGACTTTGCTTAGGCCTTTTGTTGTTAATTCGAGTAAGCGAAGGAAGGACGAACTCTCGAAAGAACGGAGTGGGAAGAAGAAGCGGGTTAAGACTTCTGATAGAGAGGAGGTAGATCCCAAGAGGAGGACTTCTGATAGAGAGGATGTAGATCACAAGAGGAGGACTTCTGATAAAGAGGAGATAGATCCCAAGAGAAGGACTTCTGATAGAGAGGATGTAGATCCCAAAAGAAGAACTTCACACTCTTCTAAAGCAGCGTTTACACCCACGAGTGATGCAAAACACTTGGCATTTTATGGAGACAGAGGTCCCAAGGTTTTCAAGGATGACATCCGGACCATAAAGAATAAAAATGCAAAAGACATAGTGGTTCGAGATCATAATTCTAATGATTCTTTTGCCGTGGGCACCATCATAGAAGTGTCAAATAACAACTTGACAACTACTGAAGAGTCTTCAGAAGCCTTATATCCTAACAAGACAAGACGCAGTCTTTCTGCTGGAGATATCTTAGTAGAAGAGAAGACTGACCATAAAGTTCTGGAGATATCTTCTAAGACTGATGACGCCGTTACATCAGTTCTTAAGCATAATTATGTTGAAAATGCCTCAGCTAAAAAGAAGGACGAAGATTGCTTGGAAGCTGATAATGCGGATGATACTTCAGTTGTAAGAAGCCTTGCAAGTCCTCAGACAGAAGATCATAGTGTTTCTGCACCAGAACTTATGAATAAGCAAGTTTCTCAAGATATTGACCGTAACCAGCAACCAAGCTCTGCACAATGCAAATTTAAGGTGAAGAGAGAAGACAGCGATGATAAGCTTAAGCACTCCAATTTTCATTCGTCTCCTATCAGTGATCTTAATAACAATGGAAAGCCATCTGATCCCACATCCAATATTGAAGTGAATGAGGCTGCAGTTCTCAGTGTTACTTCATGTGAAAATAAGGTGAGTGATGTTGGCATACCATCAGAAGTAGTCCCTGATAATCATACCAATGAAATCAATGAATTACCTGGTAAATTTTGTCATGGAAAAGAAGAAGCGGAGGGGTCTGAAGGTTCCTTGGAAACACAAAAGGGATTTTCAGAAACAAAAGATTGTTTGGATTCTGCTAAAAATCCATCAAAATCCGAAGCACTTGCACGGCCAAGTAAAATGCCAGCTTCTGTCGGAAAGTCGTCTCCAACTTCATCAACTGTGAATACCAAATCATTGAGTCATGACTTCAAATCTGAAGATACTGAAATAGCTAACCCGTTTACGAAGCATGGAGCTAAATCTGATCGTAACATTCACGTAAAGAATGAAAGTTGTCCAAATGATGCTGCAATGGATGAAATTCCAAGGAAGTATGTAAGAGAGCGGTCAAAATCCTCGTTGAAGTCCAATTCAAAAGGATTGCATTCAGTCAGGAGTACTCAAAATTCCGTTTCAAAGCAGTCAAATCCAGATGCAAGAGATTCTGTTCATTGTTCGTCATCTAAACCGTCCCTGGTTCACCAGACTGCAAGTGTTTTTGCTTCTAGTGAGACTAATACATCGATGCACCATCAAAAAGGTTTACAAGTGCAGAATAAGATTTCATCTTCAGTGTCACAGAAAGTAGAAAAGCTTAATCAAACAAATACCCATCCTTCCTCTAAGTTGAACCAGAACCAAATGCCTTCATTGAATCCTTCTCCAACATCAAATTCTTCTATGCTGAGTGATGAAGAGCTAGCTTTGCTATTACATCAAGAACTGAATAGTTCACCCCGTGTACCCCGGGTACCCCGTGCACGCAACACGGGTAGCGTGCCACAATTGACTTCTGCTAGTGCTACAAACACGCTAATGAAGCGAACATCAGTCGGAGCGAAGGAAAACTATTTGGTTTCTCGAAGAAAGTACAAGGATGCAACTAGAGATGGGTTTTGCAGTTCTCGTGAACCAGAAGATGAAACTAAAAAGATAGAGAAGGAGAAGGGTCAATCATCATCTGATCAGAGAAAACAAGACATTGCACATGTGGAAGATGCCTCTGTCAAGGAAGAAGGAGGCCGTGCATGTGTAACAGCTTCAAATTCTATTACAAGTAATGGTCTTTCCGCAACTCCTGCCATTGCAAACAGTGGTCCACCTTCCCCTCGCGAGGATCGTAGTTTGTTATCAACGAAGAACTCACCAAGGAACATATCTGATGATGATACAGCAACTGCTGGAAGGCCAGTTCATCACACTTTACCTGGCTTAATCAATGATATAATGAGCAAGGGCAGGCGCATGACATATGAGGAACTCTGTAATGTTGTGCTACCGCACTGGCCCAACTTGAGGAAACATAACGGAGAGCGATATGCATACTCAAGTCACTCCCAGGCTGTTCTTGATTGTTTGAGGAACCGACATGAATGGGCTAGGTTGGTTGACCGCGGTCCAAAGACAAATACTAATAGGAAAAGGCGTAAGCTGGATGCTGAAGAATCTGATGATAATGGGTATGACAAAGGAAAAACTTCAAAAGAGACCGAAGGGAAGAACTTTGAGTTGCAAAAAGAAGAGTTCCCTAAAGGCAAGCGTAAAGCTCGAAAGCGCAGGCGGCTGGCTCTTCAGGGAAGAGCTGTAAAGGATGTGAGGAGGAGACAAAAAGCTGACTCACTAACCGGTGAAGACGTGGGTCCTTTCTCCAATTCTAGTGAAGAGAGCATGTTTAGTGAGGATGAAATTCAAGTTGACAGAATATGCCCAGCAGGAAGTACATCAGATGAGGCGGGTAGTGCCTAA 3552 0.4276 MKGRSNRPQTSDPPPDEWVDGSWTVDCICGVTFDDGEEMVKCDECDVWVHTRCSRYVKGDDMFACDKCKNKNNNRAGTDNNTEETEVAQLLVELPTKTISMERKNNNNRSNSLSSKVASCSRRPFKLWTDIPMEERVHVQGIPGGDPSLFAGKTVSSIFGPQLWKCTGYVPKKFNFQYREFPSWYESEDKDNDSDIKDKDNGAGVLLSFSKETNSVLATSPVAALVDMRSSQAKKDFKETRTGKFGGDRMPRVHNAVKKERTLLRPFVVNSSKRRKDELSKERSGKKKRVKTSDREEVDPKRRTSDREDVDHKRRTSDKEEIDPKRRTSDREDVDPKRRTSHSSKAAFTPTSDAKHLAFYGDRGPKVFKDDIRTIKNKNAKDIVVRDHNSNDSFAVGTIIEVSNNNLTTTEESSEALYPNKTRRSLSAGDILVEEKTDHKVLEISSKTDDAVTSVLKHNYVENASAKKKDEDCLEADNADDTSVVRSLASPQTEDHSVSAPELMNKQVSQDIDRNQQPSSAQCKFKVKREDSDDKLKHSNFHSSPISDLNNNGKPSDPTSNIEVNEAAVLSVTSCENKVSDVGIPSEVVPDNHTNEINELPGKFCHGKEEAEGSEGSLETQKGFSETKDCLDSAKNPSKSEALARPSKMPASVGKSSPTSSTVNTKSLSHDFKSEDTEIANPFTKHGAKSDRNIHVKNESCPNDAAMDEIPRKYVRERSKSSLKSNSKGLHSVRSTQNSVSKQSNPDARDSVHCSSSKPSLVHQTASVFASSETNTSMHHQKGLQVQNKISSSVSQKVEKLNQTNTHPSSKLNQNQMPSLNPSPTSNSSMLSDEELALLLHQELNSSPRVPRVPRARNTGSVPQLTSASATNTLMKRTSVGAKENYLVSRRKYKDATRDGFCSSREPEDETKKIEKEKGQSSSDQRKQDIAHVEDASVKEEGGRACVTASNSITSNGLSATPAIANSGPPSPREDRSLLSTKNSPRNISDDDTATAGRPVHHTLPGLINDIMSKGRRMTYEELCNVVLPHWPNLRKHNGERYAYSSHSQAVLDCLRNRHEWARLVDRGPKTNTNRKRRKLDAEESDDNGYDKGKTSKETEGKNFELQKEEFPKGKRKARKRRRLALQGRAVKDVRRRQKADSLTGEDVGPFSNSSEESMFSEDEIQVDRICPAGSTSDEAGSA 1183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00394 1183 PANTHER UNCHARACTERIZED 1 1179 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 725 831 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 947 966 - -
Car04g00394 1183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 15 77 IPR013083 -
Car04g00394 1183 MobiDBLite consensus disorder prediction 232 261 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 270 342 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 894 1001 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 511 561 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 845 876 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 1066 1113 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 524 541 - -
Car04g00394 1183 SUPERFAMILY FYVE/PHD zinc finger 16 73 IPR011011 -
Car04g00394 1183 MobiDBLite consensus disorder prediction 483 502 - -
Car04g00394 1183 SMART PHD_3 26 69 IPR001965 -
Car04g00394 1183 MobiDBLite consensus disorder prediction 709 724 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 894 941 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 542 561 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 973 991 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 1066 1183 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 652 668 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 232 350 - -
Car04g00394 1183 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SET-26-RELATED 1 1179 - -
Car04g00394 1183 ProSitePatterns Zinc finger PHD-type signature. 27 68 IPR019786 -
Car04g00394 1183 MobiDBLite consensus disorder prediction 1127 1143 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 859 876 - -
Car04g00394 1183 MobiDBLite consensus disorder prediction 603 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00394 Car-Chr4 4041548 4049566 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00394 25 68 PHD Transcription Factor Family AT5G22260 44.681 7.72e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00394 - - gmx:100810855 1457.2