Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00387 ATGGGTTCGGGAAGCAGAAACTACTCTGCGAATCCGAACGATTACAAGCTTCTAGAAGAAGTAGGTTACGGTGCAAGCGCAACGGTTTTTCACGCAATCTATCTCCCTTACAACGAAGAAGTAGCGGTTAAATCTCTCGATCTAGATCGATGCAATTCAAATCTCGATGATATTCGAAAAGAAGCACAGATCATGAGTTTAATTGATCACCGTAACGTTGTTAAATCTCACTGTTCATTCGTTGTAGACCGTAAACTTTGGGTGATTATGCCTTTCATGGCGCAGGGTTCTTGTTTGCATCTAATGAAAGCAGCTTATCCTGATGGATTTGAAGAAGATGCTATTGGATCGATTCTTAAGGAAACTCTTAAggctttggattatcttcatcaacacggtcacattcatcgtgatgttaaagctggtaatattttgcttgattctaatggtgaagtcaaacttggtgactttggTGTTTCCGCTTCTATGTTTGATACTGGTGATCGTCAGCGTTCTAGAAACACTTTCGTTGGTACTCCTTGCTGGATGGCGCCGGAGGTGCTGCAACCTGGTACTGGTTATAATTTCAAGGCTGATATTTGGTCTTTTGGAATTACTGCATTGGAGTTGGCTCATGGTCATGCACCTTTCTCCAAGTATCCTCCAATGAAGGTTTTACTCATGACCATACAGAATGCACCTCCGGGACTTGATTACGATCGCGATAGAAAGTTCTCGAAGTCTTTTAAGGAAATGGTTGCTATGTGTCTGGTAAAAGATCAAACAAAGAGGCCGTCTGTGGACAAGTTGCTCAAGCACTCTTTCTTCAAACAAGCTAAGCCTCCGGAGATTTCTGTGAAGAAATTATTTGCTGATTTACCGCCTCTTTGGACTCGTGTAAAAGCCCTCCAGCTTAAAGATGCTGCACAACTAGCACTGAAGAGAATGCCGTCTGCAGAACAAGAAGCAATATCTCAGAGTGAATATAAGCGAGGAGTTAGTGCGTGGAACTTCGACATTGATGATTTGAAAGCTCAAGCATCATTGGTGCAGGATGATGATGATATTGCAGAGATAAAGGAAGAAGATGAAAACAAGTTCTTCAGCTCTAACAAGGATACAAGTGATTCCCAGTTTAGTGTGGACATCAGGAATTCAGATAACTTGCAACAAGATGAGTCTGCGTTACAAGTAGGTGGTAATGATGTACAACAGAGTGATAAAAGAAATGGATCAATTGCTGAGGCAGCACCATCTACTTCAGAGAAGGACATGGGAACAAGCAAGATTAGAACTCAGTCAATGAAAATTGGTAAAACCCAAAGTGGGCCGTTGATGCCTGGTGCAGTGCTTGGTAGTTATTTACCTGAAAGAGGGCGTCTATTTGAAAGGTTTGAGAATGAAAATCAGTTATTAGGTGAGAAAGGTAATCGTGATATACGACGAGCTCCAAGCTTTAGTGGTCCATTAATGCTTCCTAACCGAGCTTCGGCAAATAGTTTATCAGCTCCAATAAAATCCTCTGGAGGATTTAGAGATTCCTCAGATGATAAATCTAAGGCTAATCTAGTGCAAATTAAAGGGCGGTTTTCAGTGACATCAGAAAATTTAGATCTGGTGAAGGATATTCCTGCAAGTTCAGTCTCACGTCGATCTCCACAGGATTCCTCACCACTGAGGAAATCTGCCAGCGTTGGCGATTGGATGTTGGATTTCAAACAAATGCCAACTGGGCAGTCTTCCAATGATTCTGCCAATATCAATATCCCCGCATCAATTCTGGTGCCTCACCTTCACAATCTTTTCCAGCAGACGTCTATTCAACAGGATCTTATAGTGAGTATGTTGACTAGCTTGCAAACTGCTGAGGCAATTGATGCTTCTCAGAACGGAAAGTTGCCACCATTACCTCGCAATTTAGAGAATGGAAGTGTTGATACAACAACTTCAGAGAGAGAACAACTGCTGCTGGCCAAAATCTCAGAACTTCAGTCTCGGATGATCAGTTTGACCGATGAACTAACCTCTGAGAAGTTAAAACACCTGCAGTTGCAACAACAGATGGCTGCTTTATACAGCCAGGAACAAAACGGGGAAAGAAATGAAGGTGCATAA 2115 0.4024 MGSGSRNYSANPNDYKLLEEVGYGASATVFHAIYLPYNEEVAVKSLDLDRCNSNLDDIRKEAQIMSLIDHRNVVKSHCSFVVDRKLWVIMPFMAQGSCLHLMKAAYPDGFEEDAIGSILKETLKALDYLHQHGHIHRDVKAGNILLDSNGEVKLGDFGVSASMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDRKFSKSFKEMVAMCLVKDQTKRPSVDKLLKHSFFKQAKPPEISVKKLFADLPPLWTRVKALQLKDAAQLALKRMPSAEQEAISQSEYKRGVSAWNFDIDDLKAQASLVQDDDDIAEIKEEDENKFFSSNKDTSDSQFSVDIRNSDNLQQDESALQVGGNDVQQSDKRNGSIAEAAPSTSEKDMGTSKIRTQSMKIGKTQSGPLMPGAVLGSYLPERGRLFERFENENQLLGEKGNRDIRRAPSFSGPLMLPNRASANSLSAPIKSSGGFRDSSDDKSKANLVQIKGRFSVTSENLDLVKDIPASSVSRRSPQDSSPLRKSASVGDWMLDFKQMPTGQSSNDSANINIPASILVPHLHNLFQQTSIQQDLIVSMLTSLQTAEAIDASQNGKLPPLPRNLENGSVDTTTSEREQLLLAKISELQSRMISLTDELTSEKLKHLQLQQQMAALYSQEQNGERNEGA 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00387 704 CDD STKc_OSR1_SPAK 13 276 - -
Car04g00387 704 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 4 697 - -
Car04g00387 704 SUPERFAMILY Protein kinase-like (PK-like) 12 326 IPR011009 -
Car04g00387 704 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00387 704 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 4 697 - -
Car04g00387 704 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Car04g00387 704 Pfam Protein kinase domain 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00387 704 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Car04g00387 704 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00387 704 MobiDBLite consensus disorder prediction 397 428 - -
Car04g00387 704 Gene3D Transferase(Phosphotransferase) domain 1 96 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00387 Car-Chr4 3944187 3954211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00387 8 696 MAP Kinase Kinase Kinase Kinase AT4G10730 66.237 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Car04g00387 Pkinase 3.2e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00387 - - gmx:100783699 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00387 04 3944187 3954211 Car04g00387 04 3944187 3954211 ECH