Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00386 ATGGCCAGTCATAACATCTGCTTCTTGGTTTCTTCTCTCTTGCTTACAACATTGTTCCAAATCCAAACCAAAGTGTTATGTTACCAATACAAAGTTGGAGATCTAGATGCTTGGGGTATACCCACCTCAACAAATTCACAACTCTATGCCAAATGGTCCAAATTTCATAATCTCACCCTTGGAGACTCACTTTTATTTCTATATCCACCAAGTCAAGATTCAGTGATTCAAGTGACACAAGAATCTTACAAGAGTTGCAACATTAAAGATCCAATATTGTATATGAACAATGGAAATTCTTTGTTTAACATAACATCACATGGTGATTTCTATTTCACAAGTGGAGTGGTTGGTCATTGCCAAAAGAATCAAAAGATTCATATATCTATTGGAGGAAATGGAAATGTTGATGTAGAAGCTAATAGTCCAACTTCATTGCCTGCAAATGCACCCTCTTATCAAACAGTTTTTGGGAACATTCCAATAGCTCCTTCCTCATCAAATTCACCTCACCTAGCTTCAACTTTCCATGTTCTTATTATTGGATCCATCATATCTATAATGTTTTTTGCTTTAATGGGCAGTTTTAAAAGCTTTGATATGGAGGATTTGATTGAAACCAGATTGTACTTTTGCTTTCATTGTAGAAACCATGTTGCTCTTCATGATGATGTGATTTCAAAAGCCTTTCAGGGAAGAAATGGAAGAGCTTTTCTGTTTTCACATGCAATGAATGTAACAATAGGGCCACAAGAAGACAAGGAACTCGTTACAGGTCTTCATACAATTGCTGATGTCTACTGTTGTGATTGTTCTCAAGTGCTTGGTTGGAAGTATGAAAGAGCTTATGAGGAAACTCAGAAGTACAAGGAAGGCAAATATTGTTAG 888 0.3626 MASHNICFLVSSLLLTTLFQIQTKVLCYQYKVGDLDAWGIPTSTNSQLYAKWSKFHNLTLGDSLLFLYPPSQDSVIQVTQESYKSCNIKDPILYMNNGNSLFNITSHGDFYFTSGVVGHCQKNQKIHISIGGNGNVDVEANSPTSLPANAPSYQTVFGNIPIAPSSSNSPHLASTFHVLIIGSIISIMFFALMGSFKSFDMEDLIETRLYFCFHCRNHVALHDDVISKAFQGRNGRAFLFSHAMNVTIGPQEDKELVTGLHTIADVYCCDCSQVLGWKYERAYEETQKYKEGKYC 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00386 295 Pfam Plastocyanin-like domain 46 123 IPR003245 GO:0009055
Car04g00386 295 PANTHER BLUE COPPER PROTEIN 10 187 IPR039391 GO:0009055
Car04g00386 295 PANTHER MAVICYANIN 10 187 - -
Car04g00386 295 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 210 295 IPR004910 -
Car04g00386 295 ProSiteProfiles Yippee domain profile. 208 295 IPR034751 -
Car04g00386 295 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Car04g00386 295 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
Car04g00386 295 Gene3D - 28 141 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00386 Car-Chr4 3940006 3942967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00386 14 162 Phytocyanin Superfamily AT1G64640 57.047 3.42e-53 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00386 - - gmx:100527517 266.544