Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00382 ATGGCAATGACAATGCCTCTTAGTTTAAGGAATAAGCTCAAAACTCTTTGTGCTTGTGGTGATGGTTGGTCTTATGCAATTTTCTGGCGCTTTCATAAGACAAATCCTATGTTGTTGACTGTGGAAGAATCATATTATGAAGAGCAATTAGGAGAAGAGATTGCAAAATTGCTTCCTCAAGTGCACTTGCTGGGTGAAGGAATTGTTGGTGAAGCTGCTTTCTCCGACAAACACAATTGGTTGCACTCCGTCAGCTATGAGGATGATTCTGGATTGTATCAACAATTCTCTTCTGGAATAAAGACAATTGTGGTCATACCTATCAAATCATGGGGAGTGGTACAATTTGGATCCACAAATAAGATTTTGGAGACGATTAATTTTTTGGATCAAACACAAAGTTTGCTCAAGGAGATTGATGATATGGACATGATTGAAGTATCAGGAAATGAACTTTTACCAATGGATTTTGCAAATTATGATCTCAACGGACTGTTGGCTTCCATTTCCACTGAAAATTCATGTGATTGGACTCTCAAATATACTCTTGATGAAAACTATGATGAGCTAAGAGAAGTTTATTCTTCTACAAATCCTAATGATCCCTTCTCTTCCCAACACAAGACTTGTGAAGAAACCTCATCTCTTAGTGACCAATTGAATGGTACCATAGAAGCTTATTTGGATCCTGACTCTTCTATGAACGACAACTTGATTTCCAAAACCTCCCTTTTTGGTGAATGGTGTGGTGAAAATTCTTCTTTTGATTCATTAGGCCAACAATTTGCATCTGAAATAATGGCACAAGAAGTTGTAGATGTTTGCACTTCATTTGATAGCAGCATTGTTCATGATTCAGCATTCGTCTCATTGGACAAAGGGTCATCATTTCAAGACAATCATTCTTCTGAACCTGTTGTTGTCACAGATGTTGTTTTACCATCAAGTTCGATTGAGCCGGTCGATATGTCAGAAGAATTTTTGAAGCTCAGCTCATTGGACGATCTTTGTCAGTGGTTTGCTCCTTCTACAGATGATAGTATCTGCACAACAATGATTCAATTAGATAATAACCTTCCTGAATCAATAGAATTTAATCCAACTTTAGCTGAGCATAACACTATCACTACAACAGTTAACTCAGAAATGAAAGAAACATCTGTACTAATACACAGTTCTGAAAATGATTTCTTGGATAACTTGGAATTGGATTTGGGATGTGACCAATCTAGTGAATGGTGGGGGAATTTACTTACACCAATGGTGAGTACTGCTACCGATATCGGCTTTTCCGAATGCATATCGGAGTTGAACTATACTACTACGCTGACTGATAATCGGAAGAGGCTATTCTCAGAGTTGGGAGGAATTGAAGAGCTTTTGAAGGGTCAAGCAAATTACAACAATCCTTTTAATAGTTCAAATTTTGAGAATGAGTTACTATCATCTAATAAGAGACAGATGGTAGAATTTTCATCCATGAGTAGAACTCAAGTAAATTTTGCAAGCCTTGTTGGGGCTGAGGCTGGACCAAATTTGATGCAATCTGTTTCTGACTTGGAAAAATCCAATAGTGTTTTAACTAAGAAAGATACATTCCCAAAATTACAAGTAGGCATGTTGATTAATGATAGAAATAGCATTAATATGAAGAGGGGTGTTTCCTTACACCCTAAGAAACAAGAAGAGCCTACAAAGCCTACCAAGAAGAAGGCTAAGCCTGGAGAGAGTACTCGGCCGCGGCCAAAAGATCGACAGCAAATTCAAGACTGTATTAAAGAATTGAGAGGAATCATCCCTCATGGTGGAAAGTGTAGCATTGATTCTTTGTTAGACCGCACCATCCGATACATGCTTTTCTTACGCAGTGTCATCAAATATGCAGACATGATACATGAGCCTAATGAGCCAAAGCTTATTGAACAAGCAAATGGAGTGGTTCCAAAAGATAGCGAAAACCGTGGTGCTACATGGGCGTTTGAAGTAGGAAACCAAACAATGGTATGCCCTATTATTGTTGAGGACATGAATCCACCAGGCCAAATGCTTATAGAGATGCTTTGTGAGGATCAAGGTTTCTTCCTTGAGATAGTTGACATAATTAAAGGTTTTGGGCTGAATATCTTGAAAGCAAAAATGGAAATAAAGAAAAGTAAATTATGGGGGCGCTTTATTGTCGAGGCTAATAGACATGTGACAAGGATAGATGTGTTTTGGTCCCTTATTCATCTTCTGCAACAACCAAACATCACTGGAAGTGATTCTTCAAATAAGCATAGCAATGTTATTGATGCAAACATCGCTTAA 2307 0.3801 MAMTMPLSLRNKLKTLCACGDGWSYAIFWRFHKTNPMLLTVEESYYEEQLGEEIAKLLPQVHLLGEGIVGEAAFSDKHNWLHSVSYEDDSGLYQQFSSGIKTIVVIPIKSWGVVQFGSTNKILETINFLDQTQSLLKEIDDMDMIEVSGNELLPMDFANYDLNGLLASISTENSCDWTLKYTLDENYDELREVYSSTNPNDPFSSQHKTCEETSSLSDQLNGTIEAYLDPDSSMNDNLISKTSLFGEWCGENSSFDSLGQQFASEIMAQEVVDVCTSFDSSIVHDSAFVSLDKGSSFQDNHSSEPVVVTDVVLPSSSIEPVDMSEEFLKLSSLDDLCQWFAPSTDDSICTTMIQLDNNLPESIEFNPTLAEHNTITTTVNSEMKETSVLIHSSENDFLDNLELDLGCDQSSEWWGNLLTPMVSTATDIGFSECISELNYTTTLTDNRKRLFSELGGIEELLKGQANYNNPFNSSNFENELLSSNKRQMVEFSSMSRTQVNFASLVGAEAGPNLMQSVSDLEKSNSVLTKKDTFPKLQVGMLINDRNSINMKRGVSLHPKKQEEPTKPTKKKAKPGESTRPRPKDRQQIQDCIKELRGIIPHGGKCSIDSLLDRTIRYMLFLRSVIKYADMIHEPNEPKLIEQANGVVPKDSENRGATWAFEVGNQTMVCPIIVEDMNPPGQMLIEMLCEDQGFFLEIVDIIKGFGLNILKAKMEIKKSKLWGRFIVEANRHVTRIDVFWSLIHLLQQPNITGSDSSNKHSNVIDANIA 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00382 768 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN-RELATED 7 767 - -
Car04g00382 768 MobiDBLite consensus disorder prediction 555 587 - -
Car04g00382 768 MobiDBLite consensus disorder prediction 549 587 - -
Car04g00382 768 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 585 635 IPR036638 GO:0046983
Car04g00382 768 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 767 IPR043561 GO:0003700|GO:0006355
Car04g00382 768 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 572 621 IPR011598 GO:0046983
Car04g00382 768 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 48 IPR025610 -
Car04g00382 768 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 53 135 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00382 Car-Chr4 3886286 3890662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00382 549 755 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 50.718 1.31e-62 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00382 - - cam:101509177 1501.11