Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00376 ATGGCAACACGAAGATATACATTCGGAAGTTTGGAGGAGGCAAACCATGGAGATTCCATAAGAGCAACATTAGCTGAATTGATATCAACTTGCATATTTGTTTTTGCTGGAGAAGGCTCTGCTCTTGCTCTAACCAAAATATACAAAGATGCTGGATCATCAGCTGGGGAGTTAGTTGTACTTGCATTGGCTCATTCTTTTTCACTTTTTGCTGCTATTTCATCCACAGCTCATGTTTCTGGTGGACATGTTAATCCTGCTGTTACTTTTGGTGCTCTTCTTGGTGGAAGGATATCTGTTATTAGAGCACTATACTATTGGATTGCTCAACTTCTTGGTTCTGTAGTTGCTGCTCTTTTATTGAGACTTGTCACTAATAACATGAGACCGCAAGCATTCAGTGTGGCAGTTGGCGTTGGTGCAGGGCAGAGTCTCATACTTGAGATTGCGATGACATTTGGTTTGATGTACACTGTTTATGCCACAGCCATTGATCCCAAAAGAGGAACCGTTGGAACTATTGCTCCCTTAGCAATTGGACTTGTTGTTGGGGCAAACATTCTAGCTGGTGGCCCGTTTGATGGAGCATGCATGAACCCTGCTCGGGCTTTTGGGCCTGCTTTAGTGGGCTGGAGATGGCATTTCCATTGGATCTATTGGGTCGGTCCATTACTTGGGGCTGCAATTGCAGCACTTTTATATGAATATGTTATACTTCCAACTGTGGCtcctaatcctaatccacatccacatccacatcatcaacctTTGGCTCCTGAAGATTACTAG 789 0.4144 MATRRYTFGSLEEANHGDSIRATLAELISTCIFVFAGEGSALALTKIYKDAGSSAGELVVLALAHSFSLFAAISSTAHVSGGHVNPAVTFGALLGGRISVIRALYYWIAQLLGSVVAALLLRLVTNNMRPQAFSVAVGVGAGQSLILEIAMTFGLMYTVYATAIDPKRGTVGTIAPLAIGLVVGANILAGGPFDGACMNPARAFGPALVGWRWHFHWIYWVGPLLGAAIAALLYEYVILPTVAPNPNPHPHPHHQPLAPEDY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00376 262 PANTHER AQUAPORIN-8 1 262 IPR034294 -
Car04g00376 262 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Car04g00376 262 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 Gene3D Glycerol uptake facilitator protein. 5 243 IPR023271 -
Car04g00376 262 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 1 262 - -
Car04g00376 262 TIGRFAM MIP: MIP family channel proteins 25 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 Pfam Major intrinsic protein 16 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00376 262 SUPERFAMILY Aquaporin-like 17 244 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00376 Car-Chr4 3829009 3830083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00376 2 262 Major Intrinsic Protein MIP AT1G73190 66.165 4.34e-116 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00376 K09873 - gmx:100814469 421.394