LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car04g00358	ATGAGAGAAGTTTGGGTGAGGAATCCCCTTGGGCTGGTTACCTTCAGCTTTTGCCTCAACAAGAATCTTTGCCTTTGGTTTGGACTATTGATGAAGTTAACCACCTTTTGTGTGGTACTGAACTTCACCAGGCAGACAGTGCAAGAAGACAAAGCTCTCATCTATGAGGACTGGAGCGAGAATATTCTACCCCTGTTGGATTCAGAACCTTCAAAGCTTAACTCGATATTCTTTGGTGTGGAACAATACTTTGCAGCCAAAAGTCTTATCTCATCACGATCCTTCGAGATAGATGATTACCATGGTTTTGGCATGGTTCCCTTGGCAGATCTTTTCAATCATAAAACGGGTGCAGAAGATGTGCATTTCACCGCTTTGTCTTCTAATTATGAATCtgatgatgatgaggttgatgagggcattgttgatgaagaAGCATTGCCTCAAAATACCTCTATGGATAAGACTGAGGAGTCTGTTGTTAGCGACATGGAATGTTCTTCTGTTACTGAGGATGATACTTCAATGCTGGAGATGGTTTTGATAAAAGATGTTAGCAGTGGAGCTGAGGTATTTAATACTTACGGCATATTGGGTAATGCCGCTTTGCTTCATCGATATGGATTTACTGAGCAAGATAATGCCTACGATATCGTGAACATTGATTTGGAACTGGTAATTCAATGGTGTTCTTCTTTGTTCTCTGACCGCCACAGCAGATCAAGAATCTCTCTTTGGAGAAGGTTAGGCTATTCTAGTGGCAGCGAAAACTCGGAATATTTTGAAATATCATTTGACGGAGAACCACAGATTGAACTCCTCATTTTATTATTCATCATATTTTTACCAGATGATGTCTACAACAAATTAGACTTATCAGTAGCAATTGCTGGAAATTGTCATGAATCAAGTGAAACCACTCTTTTGATTGATAACATTTTTTCATTGAAGGAATCTAAAATGAGCATGAAACCTTTGTTGACCAAAGAAGTTTGTGATGCTTTGTTGTCGCTAGCTGATATAAGGGAGAGTCTCTATGGTTTGAAGTCAATAGAAGATGATATTGAGGCATTGGAAAAGTGTAGTTTTGTTGGAGATAAAAAGGTGTATCATTCTTTGGTGCTGCGTATCAGTGAAAGGAAGATCCTTCAAAAACTCAGAAATTATGCTTCAAAGTCATATAAGATTACTAATTCTAGTTCTGCCAGGAAGAAGTTGAAAAGAGCAACAAAGAGAGGAATTTGA	1245	0.3743	MREVWVRNPLGLVTFSFCLNKNLCLWFGLLMKLTTFCVVLNFTRQTVQEDKALIYEDWSENILPLLDSEPSKLNSIFFGVEQYFAAKSLISSRSFEIDDYHGFGMVPLADLFNHKTGAEDVHFTALSSNYESDDDEVDEGIVDEEALPQNTSMDKTEESVVSDMECSSVTEDDTSMLEMVLIKDVSSGAEVFNTYGILGNAALLHRYGFTEQDNAYDIVNIDLELVIQWCSSLFSDRHSRSRISLWRRLGYSSGSENSEYFEISFDGEPQIELLILLFIIFLPDDVYNKLDLSVAIAGNCHESSETTLLIDNIFSLKESKMSMKPLLTKEVCDALLSLADIRESLYGLKSIEDDIEALEKCSFVGDKKVYHSLVLRISERKILQKLRNYASKSYKITNSSSARKKLKRATKRGI	414

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car04g00358	414	CDD	SET_LSMT	44	210	-	-
	Car04g00358	414	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	36	395	-	-
	Car04g00358	414	Gene3D	-	212	403	IPR036464	-
	Car04g00358	414	PANTHER	RIBOSOMAL LYSINE N-METHYLTRANSFERASE 3	36	395	-	-
	Car04g00358	414	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	206	400	IPR036464	-
	Car04g00358	414	PIRSF	RMS1_SET	43	394	IPR011383	GO:0016279\|GO:0018026
	Car04g00358	414	Gene3D	set domain protein methyltransferase, domain 1	40	209	-	-
	Car04g00358	414	SUPERFAMILY	SET domain	45	214	IPR046341	-
	Car04g00358	414	ProSiteProfiles	SET domain profile.	8	196	IPR001214	GO:0005515

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car04g00358	47	412	NAC Transcription Factor Family	AT3G56570	51.478	1.15e-119	357

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car04g00358	-		K05302	gmx:100794971	517.694

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