Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00341 ATGATGAAAGGTTCTTGTTTTTTGCTTTGGCATGTTTATTGTGTTCGCCCTTTCATTGGGCCTTGCATTTCGGGTTTAAGAGAAACAACACATTCTATATTTTCGGCGTTTACTGCGTTTTTGACATTGGCAATTCTCGCACCACATGACGATTTCATCATTGTTACGGGTTCTGAAATTCTCTTCAAAAATTTCAAGTCTAAAGAAACAGTTACATATCCTTATGATGTTAGTGGAATCATAAAGCCTTCAAACTATAATGAAATTTTGTTTTTATATCAAGCAAAATGgttgttttttatttttccactttcatcacaaattgtaaaagctacaggagttgtcacacaaacagtgtggGTTCCATTGCTTGATCAAATGGATGAGAAGATGTTAGACGCAATATGCGAAAGACTAAAGCCTGCATTGTACACTAAAGGAACTTATCTTGTTCGCGAAGGTGATCCAGTAAACGAGATGTTATTTATAATTCGAGGCAATCTTGATTCTTACACCAAAAATGGAGGTTGGGTCAGATTCTTCAAGTCATGTCGAATCGGACCAGGTGATTTCTGTGGTGAAGAACTGTTGACATGGACCTTAAATCCAAGACCAAGTGTGATACTCCCTTTTTCAACAAGAACACTTAAAGCTATCTCAAAAGTTGAAGTCTTTGCACTCATAACTGAAGACCTTAAGTTTGTTGCGTCTCAATTTAGAAGACTACATAGTAAACAACTTAGGCATAAATTAGGAATTATTGGAACAAGTTGA 774 0.3295 MMKGSCFLLWHVYCVRPFIGPCISGLRETTHSIFSAFTAFLTLAILAPHDDFIIVTGSEILFKNFKSKETVTYPYDVSGIIKPSNYNEILFLYQAKWLFFIFPLSSQIVKATGVVTQTVWVPLLDQMDEKMLDAICERLKPALYTKGTYLVREGDPVNEMLFIIRGNLDSYTKNGGWVRFFKSCRIGPGDFCGEELLTWTLNPRPSVILPFSTRTLKAISKVEVFALITEDLKFVASQFRRLHSKQLRHKLGIIGTS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00341 257 CDD CAP_ED 123 251 IPR000595 -
Car04g00341 257 PANTHER - 89 120 - -
Car04g00341 257 PANTHER - 121 252 - -
Car04g00341 257 SMART cnmp_10 123 254 IPR000595 -
Car04g00341 257 SUPERFAMILY cAMP-binding domain-like 121 241 IPR018490 -
Car04g00341 257 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 89 120 - -
Car04g00341 257 Gene3D Jelly Rolls 121 241 IPR014710 -
Car04g00341 257 ProSiteProfiles cAMP/cGMP binding motif profile. 123 221 IPR000595 -
Car04g00341 257 Pfam Cyclic nucleotide-binding domain 144 207 IPR000595 -
Car04g00341 257 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 121 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00341 Car-Chr4 3533206 3535779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00341 121 250 Ion Channels AT2G28260 81.538 1.64e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00341 K05391 - dcr:108219416 229.565