Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00328 ATGGAACCAACATTGCAACGCTCTCAGTCTCATCCCACCATTCTCGGAAAGTACCAACTAACTCGCCTCCTCGGCCGCGGCAGCTTCGCCAAGGTCTACCAAGCCCGTTCCCTCCTCGATGGCGTCACCGTTGCCGTCAAAATCATTGATAAATCCAAAACCGTCGATGCCGCCATGGAGCCTCGTATAATCCGCGAGATCGACGCCATGCGACGCCTCCATAACCACCCTAACATCCTCCGAATCCATGAAGTCATGGCTACTAAAACCAAGATCCATCTCGTCGTTGAGTTCGCCGCCGGTGGTGAGCTCTTCTCCGCTCTCTCACGCCGAGGACGCTTATCCGAATCCACCGCTCGTCGCTACTTTCAACAGCTTGTCTCCGCACTTCGTTTCTGCCACCGCAACGGCGCCGCTCACCGTGATCTTAAACCACAGAATCTTCTCCTTGACGCCGACGGCAACCTCAAGGTCTCCGACTTCGGACTCTCTGCTCTCCCGGAACACCTCAAAAACGGCCTCCTTCATACTGCCTGTGGCACGCCGGCGTACACCGCTCCGGAGATTCTCCGCAGGAGTGGCGGTTACGACGGGTCCAAAGCCGACGCGTGGTCCTGTGGCCTAATACTCTACGTACTCCTCGCTGGTTACCTTCCGTTCGATGATTTAAATATTCCGGCGATGTATAAGAAGATTTCCCGGCGAGATTACCGGTTTCCAGATTGGATTTCGAAGCGGGCGCGTTTCGTGATATATAGGTTACTTGACCCGAATCCTGAAACCCGAATGAGTTTAGAGGCTCTGTTTGGGAACGAGTGGTTTAAAAAATCGCTTAAAGACGAAGCGGAAAAGAGCGTGTTTGGGTTCGATTACGGAAAGGAAGGGAAGGATTTAGGTTTGAACGCGTTTCATATAATATCCATGTCTTCGGGTTTGGATTTGAGTGGTTTATTTGAAACGACGTCGTTGGAGGGTGGGAAGAATAATACTGATAGGAGGGAAAAGAGGTTTATTTGTAGTACAAAGATGGAAGTGGTTGAGGAAAAAGTGAAAGAAGTGGGAAGGGTTTTGGGGTTTAAGGTTGAGGTTGGGAAGAATAGTGCAATTGGTTTGGTGAAAGGGAAAGTGGTTTTGGTAGTTGAGGTGTTTGAGATTATGCCTTCTCAACTTGTTTTGGTGTCTGTTAATGTGGTTGAAGGTGGGTTGGAGTTTGAGGATAATCATTGGGGGGATTTGAAAGCTGCTTTACAAGATCTTGTGCTTTCTTGGCACAATCAAGAATCTTCATGA 1290 0.4961 MEPTLQRSQSHPTILGKYQLTRLLGRGSFAKVYQARSLLDGVTVAVKIIDKSKTVDAAMEPRIIREIDAMRRLHNHPNILRIHEVMATKTKIHLVVEFAAGGELFSALSRRGRLSESTARRYFQQLVSALRFCHRNGAAHRDLKPQNLLLDADGNLKVSDFGLSALPEHLKNGLLHTACGTPAYTAPEILRRSGGYDGSKADAWSCGLILYVLLAGYLPFDDLNIPAMYKKISRRDYRFPDWISKRARFVIYRLLDPNPETRMSLEALFGNEWFKKSLKDEAEKSVFGFDYGKEGKDLGLNAFHIISMSSGLDLSGLFETTSLEGGKNNTDRREKRFICSTKMEVVEEKVKEVGRVLGFKVEVGKNSAIGLVKGKVVLVVEVFEIMPSQLVLVSVNVVEGGLEFEDNHWGDLKAALQDLVLSWHNQESS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00328 429 ProSiteProfiles Protein kinase domain profile. 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00328 429 PANTHER SERINE/THREONINE KINASE 11 426 - -
Car04g00328 429 Pfam Protein kinase domain 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00328 429 Gene3D Kinase associated domain 1, KA1 298 421 - -
Car04g00328 429 SMART serkin_6 18 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00328 429 SUPERFAMILY Protein kinase-like (PK-like) 14 280 IPR011009 -
Car04g00328 429 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 11 426 - -
Car04g00328 429 Gene3D Transferase(Phosphotransferase) domain 1 8 296 - -
Car04g00328 429 Pfam NAF domain 300 362 IPR004041 GO:0007165
Car04g00328 429 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Car04g00328 429 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00328 Car-Chr4 3385470 3387269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00328 13 425 CBL-interacting serine-threonine protein kinases AT4G14580 61.045 1.71e-171 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Car04g00328 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00328 K12761 - gmx:100784173 631.713