Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00306 ATGATGGATCATGTTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGGGGTGGGTCATTTGGAGAGCTTTACTTGGGTGTTAATGTACAGACTGGAGAGGAAGTGGCCGTCAAGCTGGAACCTGTGAAGACCAAGCATCCTCAACTTCACTATGAGTCAAAATTGTACATGCTTCTTCAAGGGGGAACGGGTATTCCCCATTTGAAATGGTTTGGAGTTGAGGGTGACTACAATGCCATGGCAATTGACCTCCTTGGACCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGGAAATTCTCTCTGAAAACAGTTCTGATGCTTGCAGATCAACTACTTAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCACCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGTAAAGCAAATCAGGTCTACGTAATTGATTATGGCCTTGCAAAAAAGTATCGGGATCTTCACACACATAAGCATATACCATATAGGGAAAACAAAAACCTCACTGGAACTGCGCGGTATGCAAGTGTTAATACTCATCTGGGAGTTGAACAAAGCAGAAGAGATGATCTGGAATCACTTGGTTATGTGCTCATGTACTTTTTGAGAGGAAGTCTCCCTTGGCAAGGTTTGAGAGCTGGCACCAAAAAACAAAAATACGACAAGATAAGTGAAAAGAAAATGCTTACTCCTATAGAGGTTTTGTGCAAGTCACATCCATTGGAATTTACATCATACTTCCATTACTGCCGATCGTTGCGGTTTGAAGACAAGCCTGATTATTCGTATCTTAAGAAACTCTTTCGGGACCTATTCATCCGAGAAGGCTATCAGTTTGATTATGTCTTTGATTGGACTATATTGAAGTATCCACAAATTGGTTCCAGTTCCAGAACCAGGCCTAGTAGCGGGAAACCAGTCATAAATCCAGGACAATCAGGAGATAGAATAGAACGGCCTTCAGGGGGACCAGAGATTCGGGATAGATTCTCAGGTGCTGTCGAGGCATTTGCAAGAAGGAATGGATCTGGGCATGGTCTGCATGGTGATCATTCCAGGCATAGGTCTTCGGATGATGTGCCATCTTCTAAAGAAGTGCAAGCTGATTCTGAGAGGCCCCGTAGCTCTTCTCGTCATGGCAGTTCTTCTAAAAGACCCGTCTTATCAAGCAGCCGTCCAAACTCCTCTGGTGAACCGAGTGAAAACCGCTCTAGCCGACTGGTCTTGAGCAGTAGCCGACTATCTACTACTCAGAGGACTCAACCAGCTTTAGAGTCCAAACCATCATTTACTCGTGCTTCTGGGACAAGAGGGGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTGTCAATTGGCACAGGAAAAAGGAAATGA 1395 0.4423 MMDHVIGGKFKLGRKIGGGSFGELYLGVNVQTGEEVAVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNAMAIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLLNRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYVIDYGLAKKYRDLHTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGTKKQKYDKISEKKMLTPIEVLCKSHPLEFTSYFHYCRSLRFEDKPDYSYLKKLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSSGKPVINPGQSGDRIERPSGGPEIRDRFSGAVEAFARRNGSGHGLHGDHSRHRSSDDVPSSKEVQADSERPRSSSRHGSSSKRPVLSSSRPNSSGEPSENRSSRLVLSSSRLSTTQRTQPALESKPSFTRASGTRGGRDDTLRSFELLSIGTGKRK 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00306 464 MobiDBLite consensus disorder prediction 386 439 - -
Car04g00306 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Car04g00306 464 MobiDBLite consensus disorder prediction 301 315 - -
Car04g00306 464 CDD STKc_CK1_delta_epsilon 9 283 - -
Car04g00306 464 MobiDBLite consensus disorder prediction 350 384 - -
Car04g00306 464 PANTHER CASEIN KINASE I-LIKE PROTEIN 2 451 - -
Car04g00306 464 MobiDBLite consensus disorder prediction 301 333 - -
Car04g00306 464 Gene3D Transferase(Phosphotransferase) domain 1 1 319 - -
Car04g00306 464 ProSiteProfiles Protein kinase domain profile. 10 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00306 464 PANTHER CASEIN KINASE-RELATED 2 451 - -
Car04g00306 464 MobiDBLite consensus disorder prediction 346 464 - -
Car04g00306 464 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Car04g00306 464 Pfam Protein kinase domain 11 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00306 464 SUPERFAMILY Protein kinase-like (PK-like) 5 291 IPR011009 -
Car04g00306 464 SMART serkin_6 10 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00306 Car-Chr4 3167768 3174472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00306 9 214 MAP Kinase Kinase Kinase AT3G06030 25.926 2.07e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Car04g00306 Pkinase 1.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00306 K08960 - mnt:21404312 821.617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00306 04 3167768 3174472 Car04g00306 04 3167768 3174472 ECH