Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00302 ATGGGCGACAATTTCCCTCATGAAAACAACCATAGCAATGGCAATAAGAATATTGTATGTGGATTGTGCAACCAAGCTTTCACTAACTTCCAATCACTCATAAATCATATTGAGGCTCATATGGCTACAGAAAATCTTGCATTAAGAAGGCTTAATAATCCTTTACAACTCAATTTTTCAACACCAATGCCGATGCAGGAGACCACAAACTTTGTTAAAAGTACGATATTTCAAGAACCACATCAACAACAACATTCTCAACATGTTATGTCACATGTTGGGAATAATAATGTTGCTGACGTAACATCATTTTCATTTTCAGCTCCACAAGAAGTTCATATGGAAGTGTCTCCTATTGATGGAACTAAGCCATACATCAACATGTTGGATAAACCCATCGATAACAATGTGTTGATCAATTCAGATAACATCAATGATGACACATTGTTGGATTTGGAGCTAAAGCTCTAG 471 0.3609 MGDNFPHENNHSNGNKNIVCGLCNQAFTNFQSLINHIEAHMATENLALRRLNNPLQLNFSTPMPMQETTNFVKSTIFQEPHQQQHSQHVMSHVGNNNVADVTSFSFSAPQEVHMEVSPIDGTKPYINMLDKPIDNNVLINSDNINDDTLLDLELKL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00302 156 ProSitePatterns Zinc finger C2H2 type domain signature. 20 40 IPR013087 -
Car04g00302 156 ProSiteProfiles Zinc finger C2H2 type domain profile. 18 45 IPR013087 -
Car04g00302 156 SUPERFAMILY beta-beta-alpha zinc fingers 14 43 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00302 Car-Chr4 3136376 3137006 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g00302 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00302 - K09228 mtr:MTR_1g075780 137.502