Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00282 ATGAATTCAGATATTTCAATTGAAGAAAATGATGATCAAGATGAAAACTCCGGAACAAAACGTTGTTATGAATGCACATTTTGCAAGAGAGGTTTCACAAATGCTCAAGCATTAGGTGGTCACATGAATATTCATAGAAAAGACAGAGCAAAAGCTAAGCAACCAACAAATTCTTCATCGTCACGACAATATACAAATTACAAATTCTACACCACCAATGATGAAGTTGTGTCTTTTCCTTTTTCTTCGGAACAAACCATAAAACAAAACTTTGATCATCACATGTATTTTCAACATCAATATTTACCACCACCAAATAACCTTGTTACAAACCAATTACCTTCAAATGTCAATGCTTTTCCATATGATCAATATTATCCAAAATCATCATCATCATCTAATTGGCCTAATTTGCATTTGAATCACCAAGAGCTTCAAGGTGCTAATTTGAGTCTTCAAATTGGTCCAACtcatgatcatgtggataataacaataataataataatcaaatcatTTGGAGTGGAAATCAGAAACAAAATGATGAAGTGGACTTGGAGCTCAGACTTGGCCTTGATCCATGA 582 0.3179 MNSDISIEENDDQDENSGTKRCYECTFCKRGFTNAQALGGHMNIHRKDRAKAKQPTNSSSSRQYTNYKFYTTNDEVVSFPFSSEQTIKQNFDHHMYFQHQYLPPPNNLVTNQLPSNVNAFPYDQYYPKSSSSSNWPNLHLNHQELQGANLSLQIGPTHDHVDNNNNNNNQIIWSGNQKQNDEVDLELRLGLDP 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00282 193 PANTHER OS07G0101800 PROTEIN 9 193 - -
Car04g00282 193 Gene3D Classic Zinc Finger 2 78 - -
Car04g00282 193 MobiDBLite consensus disorder prediction 45 64 - -
Car04g00282 193 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 193 - -
Car04g00282 193 SMART c2h2final6 23 45 IPR013087 -
Car04g00282 193 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Car04g00282 193 MobiDBLite consensus disorder prediction 154 177 - -
Car04g00282 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Car04g00282 193 SUPERFAMILY beta-beta-alpha zinc fingers 20 49 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00282 Car-Chr4 2957796 2958905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00282 23 74 C2H2 Transcription Factor Family AT5G43540 60.377 3.19e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g00282 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00282 - - cam:101503281 402.905