Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00263 ATGGAGGATCACCAGAAGGGAAAGCATGAGAAGGAGGAGAAGGGAAAGGAAGAGGTTCGTTTCCGAGGAGTAAGAAGAAGGCCGTGGGGGAAGTATGCGGCGGAGATAAGAGATCCATCAAAGCAAGGAACAAGGTTGTGGTTAGGTACCTTTGATACGGCAGAAGAAGCAGCAAGGGCATATGATAGAGCAGCATATAACTTGAGGGGTCATCTTGCAATATTAAATTTTCCAAGTGAGTATTATTCAAAAATAAGAGGGTCACCACCATATCCACCTCATTTAGCACCCCCTTCATCATCTCATCATGCAAATGCAAGTGGAAGTTCTTCTGCCCCGCAACATAGGCCCATTTTCGAGTTCGAGTGTTTGGATGACAAGATATTGGAGGAACTTCTTGGCTCAGTAGACCATAAGAACAAAAAGTAG 429 0.4476 MEDHQKGKHEKEEKGKEEVRFRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEEAARAYDRAAYNLRGHLAILNFPSEYYSKIRGSPPYPPHLAPPSSSHHANASGSSSAPQHRPIFEFECLDDKILEELLGSVDHKNKK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00263 142 Pfam AP2 domain 20 71 IPR001471 GO:0003700|GO:0006355
Car04g00263 142 CDD AP2 20 78 IPR001471 GO:0003700|GO:0006355
Car04g00263 142 PANTHER DNA-BINDING DOMAIN 1 137 IPR044808 GO:0003700|GO:0009873
Car04g00263 142 PANTHER ETHYLENE RESPONSE FACTOR 1 137 - -
Car04g00263 142 SUPERFAMILY DNA-binding domain 21 79 IPR016177 GO:0003677
Car04g00263 142 MobiDBLite consensus disorder prediction 86 113 - -
Car04g00263 142 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Car04g00263 142 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Car04g00263 142 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Car04g00263 142 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Car04g00263 142 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00263 Car-Chr4 2748158 2748681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00263 18 139 AP2-EREBP Transcription Factor Family AT3G23230 64.754 8.71e-51 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Car04g00263 AP2 1.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00263 - - gmx:100793703 177.948