Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00259 ATGGAGCAAAAAAACTTTTCTCTTCTGTTCTTGTACAGAGAGTTCAAACCACACATTTTCATGGTCCTAAGCCAAGTGGGTTATACCTTCTTATATTTTATCACTGAAGCATCCTTCAATCATGGAATGAGTCCTTACGTCTATGTTACTTATCGCCATGTTGTGGCTGGCGTTGTTATGTTCCCCTTTGCGTACTTTTTAGAGAGAAAAATAAGACCAAAGCTGACGTGTTCTCTTTTTATGGAATTTTTTGTGCTTTCAGTGTTGGGGATAAGTTTGACTCTCAATGTGTACTTTGCATGCCTGAGGGACACTTCTCCAACCTTTGTTGCTTCCGTGATCAACACCATAGCTTCCCTTACCTTCATTATTGCAGTGGTACTCAGGTTTGAGGTTGTTGATCTTCGAAATCCTCATGGTATAGCAAAAGTTATTGGGAGTTTGATATCTTTAGCTGGTGTTATGATGATAACACTATACAAGGGACCTATTATGAAAGATTTGTGGCGTCCTTTAATACATATTCAACCAAAAAGTGGTCCTATCAATGATAGTGGGTTAAAGGGTTCACTTCTTACAGTTGCATGTTGTTTTACATGGTCTTTATGGTACATTATGCAGGCATCCACTCTGAAAAGATACCCTGCTCAATTGTCACTCACTACATGGATGTGCTTCATTGGAGCAGCGCAATCAGCTCTTTTCACAGCCATAGCAGAACATAATAACCCTTCAGCTTGGATTATAGGCCTCAACATTGACTTGTGGTCCACAATATATGGTGGAATTGTTGTTGGTGGTTTGTTGATTTACATTCAACTATGGTGCACTGAGAAAAAAGGGCCAGTTTTTGTCACACTGTTTAACCCTCTTTCTACCATATTTGTGACAATTCTAGCATACTTCGTCCTCGGTGAAAAACTTTATTTGGGCAGCATCATAGGTTCATTTATTGTCATCATTGGTCTGTACTTGTTACTATGGGGGAAAGAAGGTGACAAAGAGGTTGATTTCAAAACCAAAGGTATATTGCAGCAAAATAATGAAGACCTAGAATGCAGAATATAG 1068 0.3895 MEQKNFSLLFLYREFKPHIFMVLSQVGYTFLYFITEASFNHGMSPYVYVTYRHVVAGVVMFPFAYFLERKIRPKLTCSLFMEFFVLSVLGISLTLNVYFACLRDTSPTFVASVINTIASLTFIIAVVLRFEVVDLRNPHGIAKVIGSLISLAGVMMITLYKGPIMKDLWRPLIHIQPKSGPINDSGLKGSLLTVACCFTWSLWYIMQASTLKRYPAQLSLTTWMCFIGAAQSALFTAIAEHNNPSAWIIGLNIDLWSTIYGGIVVGGLLIYIQLWCTEKKGPVFVTLFNPLSTIFVTILAYFVLGEKLYLGSIIGSFIVIIGLYLLLWGKEGDKEVDFKTKGILQQNNEDLECRI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00259 355 PANTHER WAT1-RELATED PROTEIN 15 347 IPR030184 GO:0016021|GO:0022857
Car04g00259 355 PANTHER WAT1-RELATED PROTEIN 15 347 - -
Car04g00259 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Car04g00259 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
Car04g00259 355 Coils Coil 341 355 - -
Car04g00259 355 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020|GO:0016021
Car04g00259 355 Pfam EamA-like transporter family 19 158 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00259 Car-Chr4 2706590 2709954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00259 16 354 Nodulin-like Gene Family AT5G07050 41.193 3.44e-91 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00259 - - gmx:100527877 533.487