Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00251 ATGGTAAAAGCAATAGTATCTGTGCTGTTGATTACCTCTATCCTCTTGTGTGTATCTGCAACAACAGATAATGGATATCCTAGATGTAATTGTGACGATGAGGCCAGCTTGTGGACTATTGAGAGCATTTTGGAGTGTCAAAGAGTTGGAGATTTCTTGATTGCTGTGGCCTACTTCTCCATCCCTATTGAGCTGCTTTATTTCGTCAGTTGCTCAAACGTACCGTTCAAATGGGTCCTTGTTCAGTTCATTGCTTTTATAGTCCTATGTGGATTGACACATTTGTTGAATGGTTGGACTTATGGTCCTCACACTTTTCAGCTTATGGTGGCACTTACCGTCTTTAAGATTCTCACTGCCTTGGTATCTTGTGCCACTGCTATAACGCTTGTTACTTTGATTCCTTTACTTCTCAAAGTGAAGGTTAGGGAATTCATGCTCAGGAAAAAGACATGGGATCTTGGACGCGAGGTTGGCCTTATTATGAAGCAAAAGGAGGCTGCAGTGCATGTAAGAATGCTTACTCAAGAGATTCGAAAGTCGCTGGATAGACATACGATTCTGTACACCACTTTGGTGGAGCTGTCTAAAACACTAGGCTTGCAAAATTGTGCTGTGTGGATGCCTAATGAAGAAAAAACGGTGATGAATCTCACTCATGAATTGAACGGAAGGAATTTTAATTTTTCTATACCTATTACTGATTCGGATGTTGTAAGAATTAAGGGAAGCAATGGAGTGAATATACTTAGCTCTGATTCAGCACTTGCTGTTGCCAGTTGTGGAGTTTCTACTGATGCGGGACCTGTTGCTGCAATCCGAATGCCGATGCTACGGGTTTGTAATTTCAAAGGAGGAACGCCTGAGTTAACTCAGGCGTGTTATGCAATATTGGTCTTGATTCTTCCAGCCGGAGAACCTAGATCATGGAGTAATCAGGAGCTGGAAATAATTAAGGTGGTTGCTGATCAGGTTGCCGTCGCTCTATCCCATGCTGCGATTCTTGAAGAGTCACAACTTATGAGAGAGAAGTTGGAGGAGCGCAACCGAGCTTTGCAACAGGCAAGAAGGAATGCTATGATGGCAAGCCAGGCAAGAAACTCGTTTCAGAAAGTCATGAGTGATGGTATGAGGAGACCTATGCACTCAATTTTGGGATTGCTTTCAATGATACAAGATGATAATTTAAAGAATGAACAGAAACTTATTGTAGATTCAATGCTAAGTACGAGCAATGTTCTTTCAAACTTGATAAACGATGCCATGGATAGCTCAGCAAAAGACGATGGAAGGTTTCCTTTGGAGATAAGGTCTTTTGGGTTACATTCCATGATAAAAGAAGCAGCTTGTCTTGCCAAATGTATGTGTGTTTATAAGGGCTTAGGTTTTATGGTCGACGTCGATAAGTCTTTACCCAACAATGTTATGGGTGATGAGAGGAGAGTGTTTCAGGTGATTTTACATATGGTTGGGAATCTACTTGATTGCAACCATGGGGAAGGGGGTATCCTTGTATTTCGGGTTTCGGCAGATGCTGGAAGTCAAGGGAGAAACGACAAAGGGTGGGCAACTTGGAGACCTAGCTCATCTAGCGGTGATGTAAATATTAGATTCGAGATAGGGATCAACAACAGTAGTGATTCTGAAGTTGGGAGCTCCGTTTCCTCGGGTCTCGAGGGTAGGAAATATACCAGTGATAGGTATGAGGGCAGATTGAGCTTTAGTATTTGCAAGAGGATAGTCCAGTTGATGCAAGGGAACTTATGGTTGGTACCATATACTCATGGTATTCCTCAAAGCATGACACTTCTTCTTCGGTTTCAATTACGACCGTCCATTGCAATAGCCATCTCCGAACCCGGAGAGTCATCAGAACACACCTATTCCAATTCAATGTTGAGAGGTCTGCAAGTTCTGTTAGTTGACCACGACGATGTAAATAGAGCAGTGACACAAAAATTGCTTCAGAAACTAGGTTGTGCCGTGACTTCTGCTTCTTCCGGATTCGAATGCCTTACCTTCATTGGACCTGCTGGATCTTCCATTCAAGTTGTGCTTTTGGATCTCCAAATGCCTGATATAGACGGCTTCGAAGTCGCCGCAAGGATTCGGAAGTTTAAAAGCGGAAATAGGCCAATAATTGTTGCATTGACCGCAAGTGCCGAAGAAGATTTGTGGGAAAAGTGCATGGAGATTGGTGTTAATGGGGTAATCCGAAAACCGGTTTTGATGCAAGGAATTGCTAGTGAACTCAGAAGAATTCTGATGCAGGGAAATAGTGTCCTGTGA 2289 0.4281 MVKAIVSVLLITSILLCVSATTDNGYPRCNCDDEASLWTIESILECQRVGDFLIAVAYFSIPIELLYFVSCSNVPFKWVLVQFIAFIVLCGLTHLLNGWTYGPHTFQLMVALTVFKILTALVSCATAITLVTLIPLLLKVKVREFMLRKKTWDLGREVGLIMKQKEAAVHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNEEKTVMNLTHELNGRNFNFSIPITDSDVVRIKGSNGVNILSSDSALAVASCGVSTDAGPVAAIRMPMLRVCNFKGGTPELTQACYAILVLILPAGEPRSWSNQELEIIKVVADQVAVALSHAAILEESQLMREKLEERNRALQQARRNAMMASQARNSFQKVMSDGMRRPMHSILGLLSMIQDDNLKNEQKLIVDSMLSTSNVLSNLINDAMDSSAKDDGRFPLEIRSFGLHSMIKEAACLAKCMCVYKGLGFMVDVDKSLPNNVMGDERRVFQVILHMVGNLLDCNHGEGGILVFRVSADAGSQGRNDKGWATWRPSSSSGDVNIRFEIGINNSSDSEVGSSVSSGLEGRKYTSDRYEGRLSFSICKRIVQLMQGNLWLVPYTHGIPQSMTLLLRFQLRPSIAIAISEPGESSEHTYSNSMLRGLQVLLVDHDDVNRAVTQKLLQKLGCAVTSASSGFECLTFIGPAGSSIQVVLLDLQMPDIDGFEVAARIRKFKSGNRPIIVALTASAEEDLWEKCMEIGVNGVIRKPVLMQGIASELRRILMQGNSVL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00251 762 Pfam Response regulator receiver domain 638 747 IPR001789 GO:0000160
Car04g00251 762 Gene3D - 429 608 IPR036890 -
Car04g00251 762 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 10 759 - -
Car04g00251 762 SUPERFAMILY GAF domain-like 186 332 - -
Car04g00251 762 SMART HisKA_10 365 430 IPR003661 GO:0000155|GO:0007165
Car04g00251 762 SMART REC_2 636 755 IPR001789 GO:0000160
Car04g00251 762 ProSiteProfiles Response regulatory domain profile. 637 755 IPR001789 GO:0000160
Car04g00251 762 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 350 431 IPR036097 GO:0000155|GO:0007165
Car04g00251 762 Gene3D - 636 760 - -
Car04g00251 762 Pfam GAF domain 183 329 IPR003018 GO:0005515
Car04g00251 762 Gene3D - 329 428 - -
Car04g00251 762 PANTHER ETHYLENE RESPONSE SENSOR 2 10 759 - -
Car04g00251 762 Gene3D - 173 328 IPR029016 -
Car04g00251 762 CDD HATPase_ETR2_ERS2-EIN4-like 471 605 - -
Car04g00251 762 CDD HisKA 363 425 IPR003661 GO:0000155|GO:0007165
Car04g00251 762 Coils Coil 335 362 - -
Car04g00251 762 SUPERFAMILY CheY-like 633 755 IPR011006 -
Car04g00251 762 Pfam His Kinase A (phospho-acceptor) domain 366 429 IPR003661 GO:0000155|GO:0007165
Car04g00251 762 SMART gaf_1 183 339 IPR003018 GO:0005515
Car04g00251 762 PIRSF Ethylen_sen_hybr_HK 1 762 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Car04g00251 762 CDD REC_ETR-like 636 751 - -
Car04g00251 762 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 430 592 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00251 Car-Chr4 2616546 2621049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00251 23 755 Miscellaneous Gene Families AT3G04580 57.987 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car04g00251 HATPase_c 5.6e-06 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00251 K14509 - gmx:100787425 1281.54