Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00221 ATGGCAGATGCAACGAGTCCACCTCGTGACCACGACAGTGGTGGCGACCAGAGCCCACGCGGTTCTTCCTCTGCCGCGCGTGAACAAGATCGTTTCTTGCCTATTGCTAACATTAGCAGAATCATGAAGAAAGCTTTACCTTCCAATGGAAAGATTGCTAAAGATGCTAAAGACACGATGCAAGAATGTGTTTCTGAATTCATCAGCTTTATTACTAGCGAGGCGAGTGAGAAATGTCAGAAGGAGAAGAGAAAGACTATTAATGGAGATGATTTGTTATGGGCAATGGCTACTTTAGGATTTGAAGACTATATAGAACCGCTTAAGGTGTACCTAGCAAGGTACAGAGAGATAGAGGGTGACAATAAAGGATCTGTTAGAAGTGGTGATGGATCTGGTAGACGAGATCAAGTCAGCCCTGTGGGCCAAAATGCTCAGCTTGTTCAGCAGGGTTCTTTTAACTATAATGGTTCCCAGGTGCATCCACAACATTTGGTCATGCCTTCAATGCAAAATCATGAATAG 525 0.4419 MADATSPPRDHDSGGDQSPRGSSSAAREQDRFLPIANISRIMKKALPSNGKIAKDAKDTMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYREIEGDNKGSVRSGDGSGRRDQVSPVGQNAQLVQQGSFNYNGSQVHPQHLVMPSMQNHE 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00221 174 PANTHER BNAA04G21250D PROTEIN 4 159 - -
Car04g00221 174 MobiDBLite consensus disorder prediction 1 30 - -
Car04g00221 174 SUPERFAMILY Histone-fold 29 144 IPR009072 GO:0046982
Car04g00221 174 Gene3D Histone, subunit A 19 155 IPR009072 GO:0046982
Car04g00221 174 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Car04g00221 174 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
Car04g00221 174 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Car04g00221 174 MobiDBLite consensus disorder prediction 1 16 - -
Car04g00221 174 MobiDBLite consensus disorder prediction 122 141 - -
Car04g00221 174 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 159 IPR027113 GO:0001228|GO:0006355|GO:0016602
Car04g00221 174 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 96 IPR003958 -
Car04g00221 174 ProSitePatterns NF-YB/HAP3 subunit signature. 63 79 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00221 Car-Chr4 2305505 2309872 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00221 11 168 CCAAT-HAP3 Transcription Factor Family AT2G37060 69.811 5.84e-77 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Car04g00221 CBFD_NFYB_HMF 4.3e-29 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00221 K08065 - gmx:100779577 285.804