Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00209 ATGAGCATCTCAATGTCCATGTGCAGATTAATTAGACAGCCCCTAATAAGTAATGTTCCATGTAGTGGGAAAAAATTGAATGTGAGACAAATTCAGAAAGAAAATGTAGTGTTGGTGATGGGAGCAACAGGGACAGGAAAGTCAAAGCTTTCAATTGACTTATCCACTTATTTTCCATCAGAAATAATCAACTCAGACAAAATTCAAATCTATGAAGGTCTTGACATCGTAACAAATAAAATCACCAAAGAAGAACAAAGAGGTGTACCACACCATTTACTAGGAACACACAATCCAAACATAGAGTTCACATCCAACGATTTTCGCGAAAAATCAACCTCGGCTATTGATTCAATCACAAACCGGGAACATCTACCGATTGTCGTTGGTGGCTCCAATTCCTACCTGGAAGCCTTAGTCGACGACGACGATTACAAATTTCGATCCAGGTACAACTTTTGTTGTCTTTGGGTCGATGTGTCAATGCCTGTTCTTCATTCCTATGTGGAACAACGCGTCGATCAAATGCTTAACAATGGAATGGTGAATGAGTTAAGACCCTTTTATAATCCAAACGGCGATTACTCAAAAGGCATAAGAAAAGCCATTGGTGTTCCTGAATTTGATGAGTATTTTAGAATGGAAAATTTAGTGGATGATGAAAGTAGGAAATTGTTGGTTGAAAAAGCAGTGAGTGAAATGAAGATGAATACGTGGAAACTAGCTAGGAAACAGTTGAGGAAGATTCATTGGCTTAAGAATGTTAAGAGATGGGAGATTCATAGATTAGATGCTACACCTGTGTTTAAGAAGAGTGGAAAAGAAGCTGATGAAGCCTGGAAGAAGATTGTTGCAGAGCCAAGTGCTATGATTCTGGCACACTTTTTATATAACTCATCAAATACAGCAACAAATGTTGTTTCTTCCAATCTTAGAGTGCCTATTTCATCTCAGAATGTTTTGGCTGCTGCAACATGCTAG 981 0.3833 MSISMSMCRLIRQPLISNVPCSGKKLNVRQIQKENVVLVMGATGTGKSKLSIDLSTYFPSEIINSDKIQIYEGLDIVTNKITKEEQRGVPHHLLGTHNPNIEFTSNDFREKSTSAIDSITNREHLPIVVGGSNSYLEALVDDDDYKFRSRYNFCCLWVDVSMPVLHSYVEQRVDQMLNNGMVNELRPFYNPNGDYSKGIRKAIGVPEFDEYFRMENLVDDESRKLLVEKAVSEMKMNTWKLARKQLRKIHWLKNVKRWEIHRLDATPVFKKSGKEADEAWKKIVAEPSAMILAHFLYNSSNTATNVVSSNLRVPISSQNVLAAATC 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00209 326 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 27 302 - -
Car04g00209 326 Gene3D - 33 296 IPR027417 -
Car04g00209 326 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 260 - -
Car04g00209 326 Pfam IPP transferase 69 142 - -
Car04g00209 326 Pfam IPP transferase 147 247 - -
Car04g00209 326 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 302 IPR039657 -
Car04g00209 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 144 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00209 Car-Chr4 2138045 2139502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00209 149 309 C2H2 Transcription Factor Family AT2G27760 29.630 4.23e-23 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00209 K10760 - gmx:100803964 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00209 04 2138045 2139502 Car04g00209 04 2138045 2139502 ECH