Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00173 ATGGGGAACGTAGACTATGCGTACACATGTTCTTCGGTTGAAGAGAGTGTGCAGCGAGTAGCTGTACCACCTGATCAGCCATTTTTGAAGTCTATGAAATATTCACTGAAAGAGACTTTCTTTCCAGATGATCCTTTGAGGAGGTTTAAGAATCAACCACCTTCAAAAAAGTTTATCCTCGCTCTTCAATATTTCTTCCCAATATTTGAATGGGCACCTAACTACAGTTTTCAGTTCTTGAAATCTGATCTCATAGCTGGAATCACTATTGCTAGCTTAGCTATTCCTCAAGGCATTAGTTATGCCAAACTCGCCAACCTTCCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCGTTGATTTATGCAATGATGGGTAGTTCAAGGGATTTAGCAGTTGGGACAGTGGCAGTTGGATCTCTTCTAATGGGTTCCATGTTGGGCAGTGAAGTTAATCCCAACCAAAATCCAAAGCTTTTTCTCCACCTTGCTTTCACCGCCACATTCTTTGCTGGCGTTTTTCAGGCTTCCTTGGGTCTCTTTAGGTTAGGGTTTATCGTGGATTTCCTATCACATGCAGCCATAGTAGGATTCATGGGAGGAGCAGCCACGGTGGTTTGTCTTCAGCAGCTCAAATCGATTTTAGGTCTTGAACATTTCACCCATGCTGCGGATCTCATTTCAGTCTTGCGCTCTGTTTTTACCCAAACTCATCACTGGAGGTGGGAAAGCGCTGTGTTAGGAATTTGCTTCATTTTCTTTCTCCTTGTCACAAGATACTTCAGTAAAAAACAACCGAAGTTCTTCTGGGTGTCAGCAATGACGCCGTTGATGTCCGTTATATTGGGAAGTCTGTTGGTTTATTTCACTCATGCTGAGAATCACGGCGTTCAAGTGATAGGAGAATTGAAGAAAGGAGTAAATCCAGCATCACTCACAGAATTGGTGTTTGTGTCGCCTTATATGACAACGGCTATCAAAACAGGAATTGTCACTGGCATCATAGCTCTTGCGGAAGGAATAGCTGTTGGAAGAAGCTTTGCAATGTTTAAAAACTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACTACAGGACCATTTTCGCGTTCGGCTGTGAACTATAATGCTGGATGCAAGACTGCAGCATCCAACATTGTAATGTCAATTGCAGTCATGTTGACATTGTTGTTCTTGACACCTTTGTTCTATTACACTCCTCTTGTGGTACTAGCAGCTATAATTGTATCTGCAATGCTTGGCCTTATAGATTATGAAGCAGCCATCCATCTGTGGAAGGTCGACAAATTCGATTTTTTCGTATGCATTAGTGCATATATTGGTGTTGTCTTTGGCAGTGTTGAAATTGGCTTAGTCATAGCAGTTGCAATATCTGTTCTTAGGATACTGCTATTTATTGCAAGACCAAGGACATTTGTTTTAGGAAAGATTCCAAATTCTGAAATATACAGAAATGTTGAGCATTATCCAAATGCAAACCGTGTTTCTGGAATACTAATTCTAAAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGATAGAATTAAAGCTACAGGGGAGACAAATTTGCAGTATATTATAATAGATATGAGTGCTGTTGGGAATATTGATACAAGTGGAATAAGTATGCTTGAAGAGACTAAGAAAATTGCTGAAAGAAGAGAGCAGCAACTTGTTTTGGTCAATCCCGGAAGTGAGGTGATGAAGAAACTAAACAAATCCAACTTCCAAAAGGATATAGGAGGAAAATGGATCTATCTGACACTTGAAGAGGCTGTTAGAGCATGTAACTTTATGCTCCATGCATGCAAAACAAATCCCAAAAGAGATGAATCAGAGGGATGGAACAATGTCTGA 1971 0.4039 MGNVDYAYTCSSVEESVQRVAVPPDQPFLKSMKYSLKETFFPDDPLRRFKNQPPSKKFILALQYFFPIFEWAPNYSFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLGSEVNPNQNPKLFLHLAFTATFFAGVFQASLGLFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHAADLISVLRSVFTQTHHWRWESAVLGICFIFFLLVTRYFSKKQPKFFWVSAMTPLMSVILGSLLVYFTHAENHGVQVIGELKKGVNPASLTELVFVSPYMTTAIKTGIVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMSIAVMLTLLFLTPLFYYTPLVVLAAIIVSAMLGLIDYEAAIHLWKVDKFDFFVCISAYIGVVFGSVEIGLVIAVAISVLRILLFIARPRTFVLGKIPNSEIYRNVEHYPNANRVSGILILKIDAPIYFANASYLRERITRWIDEEEDRIKATGETNLQYIIIDMSAVGNIDTSGISMLEETKKIAERREQQLVLVNPGSEVMKKLNKSNFQKDIGGKWIYLTLEEAVRACNFMLHACKTNPKRDESEGWNNV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00173 656 PANTHER SULFATE TRANSPORTER 2 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car04g00173 656 SUPERFAMILY SpoIIaa-like 514 634 IPR036513 -
Car04g00173 656 TIGRFAM sulP: sulfate permease 67 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car04g00173 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016021
Car04g00173 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Car04g00173 656 Pfam STAS domain 512 630 IPR002645 -
Car04g00173 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
Car04g00173 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Car04g00173 656 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 654 - -
Car04g00173 656 Gene3D STAS domain 491 636 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00173 Car-Chr4 1784595 1789859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00173 18 656 Inorganic Solute Cotransporters AT4G02700 69.219 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00173 K17471 - gmx:100810196 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00173 04 1784595 1789859 Car04g00173 04 1784595 1789859 ECH
Car03g02271 03 68686978 68694630 Car04g00173 04 1784595 1789859 PCT