Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00167 ATGATTAGAAATATTTCACCACAACACCTATTATTCGCGTTAGGGTTTCTCCTTTCCACCACAGTAATCCCCTTCGCTCGCGGCGAATCATCCACGTGTTTGACGGTTTATAAAAACGGTGGTGCTCCGGCTGTGTTCAAATCCCCAAAATGCCCCCGCTGGAACCTCTTCGAATACGGTTCTACTTCTCAAACCACGGCGCGTTGCCAATCCGCGATGCTCCAAGGTCGAAGAAAATCTCAAGAGGACCGCACTCTCTGCGTCCTCGACGTTCGTATTCCATTTCCCGCAGGTGCAACGAGGATTAAGGAGGTTGTGGTTGGGATCGTGGCGGTTTTCGATGGTCATAACGGTGCAGAAGCAAGTGAAATGGCGTCGAAACTTTTGCTGGAGTATTTTGTTCTGCACACTTATTTTCTTCTTGACGCCACGTATTCTGTTATGTCGAAGGCATCGGGAACGTTGCTTCATAGGAGTGATTATGATCACGTAAACATACTGCATAGATGGAAAGAGCTTTTAGGTTCGCAATCGCATGAACGGCATTCTGAAAGGTTTCAGAATACATTTTCTGCAAATTTTGGTGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTAAGAGCAATCCATGATATTGATGCAAAGTTTTCTGAGGAAGCCTCTAGAAACGGTCTTCATTCCGGATCTACAGCAACCATTGTATTGGTTGCAGATGATAAAATTTTGGTTGCCAATATTGGAGACTCCAAGGCTTTCTTGTGCTCTCAAAATTTCCAGTCTCCTAAGGAGGCTAAAGCCTCTTTATTAAAGCTATATAGGCAGAAAGAGCATGATGGTTCTGTTTCTGTGTGGGATCGCGAAAAGTACAGATTAGCTTCTTCCCACGGGCTAACTCATTTTGCAGTGAAGGAATTGACTAGTGATCACCATCCAGACAGAGAGGATGAAAGAGCTCGGGTGGAAGCAGCTGGTGGTCAAGTTATAAATTGGGGTGGTTTGCCTCGTGTAAATGGCCAGTTGGCTATTACACGGGCTATTGGTGATGTATTCTATAAAAGTTATGGAGTTATATCTGCACCAGAAGTGACTGATTGGCAGTCTCTAACTGCTAACGATAGCTATTTGGTGGCTGCGTCTGATGGAGTCTTTGAGAAGTTGAGTGTGCAGGATGTCTGTGATATGTTGTGGGAAGTACCCTGTTTTAGTGACATGAGATCAAAGTGCACCTCTTCATCTTCTAATTCACTAGCAGATTTTATTATTAATACTGCCTTGAAAAAGGGCAGTATGGACAATATGGCAGCAGTTGTTGTTCCTCTGGAATCTGTCAAATTCCCTGCAAACTCGCTTAGAAGAAGCTACACTGAAAATGGGGATGCAGGTTTCCCATTATTTGGTCTGGAGGAATCTGCTTACAGAAGCTCAGATAATGGCATCTTCTCTGATCTAATGCACTTGGAGCACCCTCATCTACTAGATACCAAGTTTAAGCGAATATTGGTTGAAGTGAAACATGGTGATTTTGGATGTTTTTATTTATCTGAAAATCTCGGTGATTCAGTGGATTCTAAGTGGCCCGCCAAAAAATTTGACTGGGAAGACTATTTATATGAACTACCCCAGACTCTACCAGATTCCCTTCATCAACAAGCTGCAGTAGATGGCCCTATAATTTTGTACAACGACCAAAACTTCTGCTTTCACCTGGGTTCAACTATCAATGAAGCCAAAGACCAATGCATAAATCCTGAAGGCTTTGCCAGTTTCATTGGTCTTCTTGAATCAATACCTTTACATGAGACTGGTTCAGATAATGGGTCTTCTGATTATTCGATGCCTGATTCAAGGTATGTCTTAAGGAGGAGTTTCGGTCGTGGATCATATGGCGAAGTATGGTTGGCTTTTCATTGGAATTGTAATCAAGGTAATATTACTGCAAAAATGAGCAAGGGTGACAATAATAGAAACGGCAGCTCAAGTAATCCTGAATGTGAGGATGGCCCTTCTAACTACACACTGTACATTTTGAAACGTATAATGGTAGAGAAAGGGGCTGCTGTGTACTTAAGTGGGCTTAGGGAAAAGTATTTTGGAGAAATTTTCTTGAATGCCTCTATGTGCTTTGAAGACGTGCTGTCAGCTGGAAAATCAAACTGTGTATTCGAAACATCACCAGATGGCTCTGACTATTCATTTCAAAACAAATTTCAACTACAAAGGGCCAAGTATGAAGAAGGATTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCTCGATCCAAGGAAATATGGCTCGTATTTAGTTATGAAGGAGTGTCATTGTCAAAGCTCTTATATACTGTAGAAGATGTAAATGATACTTCTGAGAAAGAAAGACTGGAACAAGTGAAACAGGTTCAGATACTACGTCCATCAAAGTGGTGGCATTGGTTGAAAACAACAGAAGAAGGGCAAGAGGAAATGCGCAGCCTTATCTGGCAGCTG 2493 0.4212 MIRNISPQHLLFALGFLLSTTVIPFARGESSTCLTVYKNGGAPAVFKSPKCPRWNLFEYGSTSQTTARCQSAMLQGRRKSQEDRTLCVLDVRIPFPAGATRIKEVVVGIVAVFDGHNGAEASEMASKLLLEYFVLHTYFLLDATYSVMSKASGTLLHRSDYDHVNILHRWKELLGSQSHERHSERFQNTFSANFGDSFHLEILKEALLRAIHDIDAKFSEEASRNGLHSGSTATIVLVADDKILVANIGDSKAFLCSQNFQSPKEAKASLLKLYRQKEHDGSVSVWDREKYRLASSHGLTHFAVKELTSDHHPDREDERARVEAAGGQVINWGGLPRVNGQLAITRAIGDVFYKSYGVISAPEVTDWQSLTANDSYLVAASDGVFEKLSVQDVCDMLWEVPCFSDMRSKCTSSSSNSLADFIINTALKKGSMDNMAAVVVPLESVKFPANSLRRSYTENGDAGFPLFGLEESAYRSSDNGIFSDLMHLEHPHLLDTKFKRILVEVKHGDFGCFYLSENLGDSVDSKWPAKKFDWEDYLYELPQTLPDSLHQQAAVDGPIILYNDQNFCFHLGSTINEAKDQCINPEGFASFIGLLESIPLHETGSDNGSSDYSMPDSRYVLRRSFGRGSYGEVWLAFHWNCNQGNITAKMSKGDNNRNGSSSNPECEDGPSNYTLYILKRIMVEKGAAVYLSGLREKYFGEIFLNASMCFEDVLSAGKSNCVFETSPDGSDYSFQNKFQLQRAKYEEGLNHIARYVESFESRSKEIWLVFSYEGVSLSKLLYTVEDVNDTSEKERLEQVKQVQILRPSKWWHWLKTTEEGQEEMRSLIWQL 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00167 831 Pfam Protein phosphatase 2C 200 435 IPR001932 -
Car04g00167 831 SMART PP2C_4 60 440 IPR001932 -
Car04g00167 831 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 21 606 - -
Car04g00167 831 ProSiteProfiles PPM-type phosphatase domain profile. 68 442 IPR001932 -
Car04g00167 831 SUPERFAMILY PP2C-like 65 443 IPR036457 -
Car04g00167 831 PANTHER ALPHABET, ISOFORM E-RELATED 21 606 - -
Car04g00167 831 Gene3D - 62 447 IPR036457 -
Car04g00167 831 CDD PP2Cc 75 442 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00167 Car-Chr4 1702590 1721395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00167 124 510 PP2C-type Phosphatase Gene Family AT3G63320 50.769 8.26e-117 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00167 - - gmx:100781476 1336.24