Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00154 ATGTCGAATCACCCTTCCGAAACCCCCGCCGACGATTTCCTTGAGCAAATTCTCGGCCTCCCAAATTTCACTTCTACCGACGGAACCGACGCTTCTTCCTTAGCTGCTCCGATGATGCTGCAGCTCAACTCCGGCGACGCAGCTAACCACCTTGCTGCCGGAACAGGCTTTCATACACCGGTCTATCATTTGGGCCTGAGCTTGGACCAGGGGAAAGGAGGGTTCTTGAAGCCCGATGATGCTTCTGGGAGTGGCAAACGCTTCCGTGAGGATGTTGTTGATACCAGACCTAAGATGAATACTTTTCATGGGCAACCCATGCCTACTACGGTTCCTACTGCTCCACATCCACCGGCAATGCGTCCTAGAGTGCGGGCAAGAAGAGGACAGGCGACCGATCCACACAGCATCGCTGAAAGGTTGCGCAGAGAAAGAATAGCTGAAAGAATCAGGGCTTTGCAAGAACTTGTTCCTAGTGTCAACAAGACAGATCGAGCTGCCATGCTGGATGAAATCGTTGATTATGTCAAATTCTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTGGGTGGAGCTGGTGCAGTGGCGCCACTGGTAACTGACATACCATTATCGTCAGTCGAGGAAGAAGGAAGTGATAGTGGAAGAAACCAACCAGCTTGGGAGAAGTGGTCTAATGATGGCACTGAAAAGCAAGTAGCTAAGCTCATGGAAGAAAATGTTGGGGCTGCCATGCAGTTCCTTCAATCGAAGGCACTCTGCATTATGCCCATCTCACTGGCATCAGCAATATACCAATCACAACCTTCAGACTCCTCCAGTATAGTAAAGCCTGAAACCACTCCTCCGTAG 858 0.5012 MSNHPSETPADDFLEQILGLPNFTSTDGTDASSLAAPMMLQLNSGDAANHLAAGTGFHTPVYHLGLSLDQGKGGFLKPDDASGSGKRFREDVVDTRPKMNTFHGQPMPTTVPTAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGSDSGRNQPAWEKWSNDGTEKQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPSDSSSIVKPETTPP 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00154 285 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 7 275 - -
Car04g00154 285 Pfam Helix-loop-helix DNA-binding domain 135 179 IPR011598 GO:0046983
Car04g00154 285 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 7 275 - -
Car04g00154 285 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 128 189 IPR036638 GO:0046983
Car04g00154 285 MobiDBLite consensus disorder prediction 212 227 - -
Car04g00154 285 Gene3D - 125 187 IPR036638 GO:0046983
Car04g00154 285 MobiDBLite consensus disorder prediction 98 134 - -
Car04g00154 285 SMART finulus 136 185 IPR011598 GO:0046983
Car04g00154 285 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Car04g00154 285 MobiDBLite consensus disorder prediction 209 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00154 Car-Chr4 1540638 1544698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00154 57 285 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 78.298 5.49e-116 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car04g00154 HLH 1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00154 - - gmx:100793177 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00154 04 1540638 1544698 Car04g00154 04 1540638 1544698 ECH