Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00139 ATGTTTGAAAAGCAATCATCACCCGAATTAGCTTCAAATTATGCATCAAGTAGTGGCTTGTCGGGGGATGATAAAGAGATTGGTTATAGAGCTTCAACATTAAAGCATGGGTATCTTTTGGCTAATAATTCTTCTCTGCATTTCTTACCCAACAAAATTGACTTGAACTTTGCTCGAATGGTGATGGCAGAGGTGGTGGGTACTTTTATATTGATGTTTTGTGTATGTGGAATCATTGCAAGCACACAACACCAAAATGGTGCAGTAGGCCTTCTGGAGTATGCAGCTACAGCAGGATTAACAGTTGTTGTCATAATTTTCTCTATAGGCCCAATTTCTTGTGCACATGTTAACCCAGCTGTTACAATAGCCTTTGCAACAATTGGTCAATTTCCATGGTTTAAGGTTCCAGTTTACATAATAGCACAAACAATAGGATCTTTGATGGCAACATATATTGGTAGCCTTGTGTATGGCATAAAATCAGATGTTATGATGACACAACCACTTCAAGGATGCAACTCTGCCTTCTGGGTGGAGGTTATTGCAACTTTCATCATCATGTTTTTGGTTTCAGCTTTGACATCTGAACATCAATCAGTGGGCCATTTATCCGGTTTTGTTGCTGGAATTGCAATTGGGCTTGCTGTACTAATAACAGGCCCTGTTTCAGGTGGATCAATGAATCCAGCAAGATCACTAGGTCCAGCAATTGTATCATGGAAATTTAATTACATTTGGATATATATCATAGCCCCAAGTTCAGGAGCTATAGCAGGAGCTCTAATGTTCCGTTTCCTACGTCTTCAAGACCAACAATGCACCTCCTCAAACATCACTAATGTTGGTCACCCCATACCCTTTTGTGCAAAGTATAATGGCAAACCTAGTGTCACACAGATCGTGGTGGCTTCTTCCATTGGGTTGATAATTGCTGCAGCAATGCATTATCGCCTAAAACAGATTAGAGATCGAAAGATCATCCCACGTTTGAGATTAGCAAAGTCAGGACAAACCCCAAAGCTTGAGAGATTCTCTCATTACGTAGCTAGGCAAATGGGGTTCAAAGATAGGAGAAGTTGTCCTAATTTATGTAAATTGGCTTCTGAATACATAAGGAAAGCTGATGGATGTGAAGATGATATCTATGCCTTCTTTGAAAATGAACAAAATGCGGATTCACTTTTTGTCAAGCTTGTGGAGGAGTTTGAGAGATGTATTCTTAGTTACTTTGCATTTCATTGGAGCCTTGGTGATTTATTGATAAGTCAGGTCTTGAGCTCTGACACTGAACCAAAAAAGAAGTTCAAGCACATAGTTATGGCAGCAACTAGGGATCAAAGGGTTGAAAGGGTAACAAAAAATCTGAAGGTGGCTAGAGTTTTCAATACATTAGTAGAAGAGATGAAAGCAATGGGACTTGTAACAAATGATGACAATAGATGCACAGAGGTGATGGCTCCAGTGGCTCACAGTGATAGGAGTCCAGTGCTTCTTTTCATGGGTGGGGGTATGGGAGCTGGCAAGAGCACTGTTCTTAAAGATATTCTCAAAGAGCCTTTTTGGGTTGGAGCAGCTAGCAATGCTGTTATCATTGAGGCAGATGCTTTCAAAGAATCAGATGTTATCTATAAGGCACTAAGTTCAAGAGGGCATCATGACATGATTCGAATGGCTGAATTGGTACACCAATCATCAACAGATGCAGCCTCATCCCTCTTAGTAACAGCACTAAATGAAGGAAGAGATGTGATTATGGATGGCACATTCTCATGGGTACCATTTGTTGTGCAAACAATAACGATGGCTAGAAATGTCCACCGCCGCCGTTACCGCATGGGAACTGGCTACAAGGTGAATGATGATGGAACTACAACAGAAAGCTACTGGGAACGAATTGAAAATGAAGAACCTGAACAAGTTGGAGGGAAAAAAAGGAAACCATATAGAATAGAGCTTGTTGGAGTAGTATGTGATGCTTACCTTGCAGTTATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAAATCACAATTGAAATCTCATAGGAGATTTGCTGATGCATTTTTGACCTACTGTCAGCTAGTAGATAATGCCAGGTTATACAGCACAAATGCTTTGGAAGGCCCTCCCAAGTTGATAGGATGGAAAGACAGAGACAAGACACTGCTGGTTGATCCAGATGAAATTGATTGTTTGAAGAGAGTTGCTAGGTTGAATGAAGATGCTGACTCCATACATGAACTTTACAAGCACCCAAACCCAACATGCGAAGCCGGATCGATATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAATATCCAACAGGAGCTGAAGTTTTCAATTCAAAAGGTTGAGAGATACGGAATCCAAACTGCTAACTTGATGGAGCAGTGA 2415 0.407 MFEKQSSPELASNYASSSGLSGDDKEIGYRASTLKHGYLLANNSSLHFLPNKIDLNFARMVMAEVVGTFILMFCVCGIIASTQHQNGAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQFPWFKVPVYIIAQTIGSLMATYIGSLVYGIKSDVMMTQPLQGCNSAFWVEVIATFIIMFLVSALTSEHQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFNYIWIYIIAPSSGAIAGALMFRFLRLQDQQCTSSNITNVGHPIPFCAKYNGKPSVTQIVVASSIGLIIAAAMHYRLKQIRDRKIIPRLRLAKSGQTPKLERFSHYVARQMGFKDRRSCPNLCKLASEYIRKADGCEDDIYAFFENEQNADSLFVKLVEEFERCILSYFAFHWSLGDLLISQVLSSDTEPKKKFKHIVMAATRDQRVERVTKNLKVARVFNTLVEEMKAMGLVTNDDNRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWVGAASNAVIIEADAFKESDVIYKALSSRGHHDMIRMAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTITMARNVHRRRYRMGTGYKVNDDGTTTESYWERIENEEPEQVGGKKRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHRRFADAFLTYCQLVDNARLYSTNALEGPPKLIGWKDRDKTLLVDPDEIDCLKRVARLNEDADSIHELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKFSIQKVERYGIQTANLMEQ 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00139 804 SUPERFAMILY Aquaporin-like 55 271 IPR023271 -
Car04g00139 804 PANTHER UNCHARACTERIZED 290 798 IPR044802 -
Car04g00139 804 CDD MIP 59 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 PRINTS Major intrinsic protein family signature 59 78 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 PRINTS Major intrinsic protein family signature 179 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 PRINTS Major intrinsic protein family signature 247 267 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 PRINTS Major intrinsic protein family signature 210 232 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 MobiDBLite consensus disorder prediction 1 20 - -
Car04g00139 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 629 IPR027417 -
Car04g00139 804 Pfam Zeta toxin 490 626 IPR010488 GO:0005524|GO:0016301
Car04g00139 804 Gene3D - 478 715 IPR027417 -
Car04g00139 804 Pfam Major intrinsic protein 56 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Car04g00139 804 ProSitePatterns MIP family signature. 116 124 IPR022357 -
Car04g00139 804 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 290 798 - -
Car04g00139 804 Gene3D Glycerol uptake facilitator protein. 38 280 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00139 Car-Chr4 1385253 1395138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00139 61 272 Major Intrinsic Protein MIP AT5G37820 39.906 3.36e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00139 - - mtr:MTR_1g070385 1473.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00139 04 1385253 1395138 Car04g00139 04 1385253 1395138 ECH
Car03g02301 03 68986361 68990858 Car04g00139 04 1385253 1395138 PCT