Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00131 ATGGGCATGCCCGAAAACATAATTGTCGGTTCTCACGTTTGGGTTGGAGATCCAGAATTAGTTTGGATTGATGGAGTAGTACTGAATATTAACGGAGAAGAAGTTGAAATTCAAACTAGCAATGAGAAGAAGGTAGTTTCCTGTTTGTCAAAATTACATCCCAAGGATACAGATGCTCCTACAGATGGAGTAGATGACATGACCAAGCTTGCTTATTTGCACGAGCCAGGAGTGCTGCATAATTTGGAGACTCGATACAAGATCAATGAAATATATACTTATACTGGAAATATTCTTATTGCAATCAATCCCTTCCAAAATCTTCCACACCTCTACGATGCTAATGCAATGAAAAAATACAAGGGAGAAAAAATTGGAAATTTAAGCCCACATGTTTTTGCTATTGCCGAAGCAGCATATAGGGCTATGATTACTGAGGAGAAGAGCAATTCTATTCTGGTTAGTGGTGAGAGTGGTGCTGGTAAGACAGAAACCACCAAAACACTTATGCTTTACTTGGCATATTTGGGTGGTCACACTGCATCTGAAGGACGGACTGTTGAACAACAAGTTCTAGAATCAAACCCAGTTCTTGAAGCATTTGGTAATGCAAAAACAGTTAGAAATGACAATTCCAGCCGTTTCGGAAAATTTGTTGAGATTCAATTTGATAAGATTGGACGAATATCCGGTGCAGCTATTAGAACTTATCTACTTGAGAAATCACGTGTTTGCCAAATATCAGATCCTGAGCGTAACTATCACTGTTTCTATCTTCTCTGTGCTTCTCCTCCTGAGGAAAAGGAGAAATATAAGTTGGGAGATCCAAGGTCATTTCATTACCTTAATCAATCCAGTTGCTATGAATTAACTGGTGTTAATGCTGCTCAAGAGTATCTTAGCACCAAGAGAGCCATGGATATTGTGGGAATCAGTCAGGAGGAGCAGGATGCAATTTTCAGAGTTGTTGCTGCTATTCTCCATCTTGGAAACGTTAGATTTGCAAAATCAGAAGAAACAGATTCATCAGTTTTAGCAGATGAAGATTCCAAGTTCCATCTCCAAACAACTGCAGAACTTCTCATGTGTGATCCTAATGCTGTGGAAGTTGCACTCTGTAAGCGTGTGATGATCACCCCAGAAGAAATCATCGAAAGAAGTCTTGATCCTCTCGCCGCAACAGTTAGCAGGGATGGTTTAGCAAAGACATTATATTCTCGATTATTTGACTGGTTAGTCCAGAAAATTAATATTTCCATTGGGCAAGATCCTACCTCAAAATATCTCATTGGTGTTCTTGACATTTATGGCTTTGAAAGCTTTCAAACTAATAGTTTTGAGCAGTTTTGCATCAATTTTACGAATGAAAAGCTGCAGCAGCACTTCAACCAGCATGTATTTAAGATGGAGCAAGAGGAATACACAAAAGAAGAGATTGATTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTACTAGATCTCATTGAAAAGAAACCTGGTGGAATAGTTGCTTTGCTTGACGAGGCTTGTATGTTTCCCAAGTCAACTCATGAAACATTTTCAACAAAGCTTTATCAGACATTCAAAGATCACAAACGCTTCATCAAGCCAAAATTGGCACGCTCAGACTTCACTATTGTTCATTATGCAGGGGAGGTCCAGTATCAGTCTGAGCAGTTCCTAGACAAAAACAAAGACTATGTTGTTCCTGAACATCAAGACATGCTAAGCACTTCCAAATGTTCATTTGTAGCAGAGCTTTTTCCTCCACTTTCTGAGGAGACAGCCAAATCTGCTAAATTTTCTTCTATTGGTTCTCGTTTTAAGCTACAATTACAACATTTGATGGATGCACTCAATCTGACAGAGCCCCACTATATTAGATGTGTGAAGCCAAATAGTCTATTAAAACCTGGCATATTTGAGAATATGAACGTCATCCATCAATTACGTTCTGGTGGTGTTCTTGAAGCAGTGAGAATAAAATGTGCTGGATTCCCCACTCACAGGACCTTTCATGAATTTTTAACTCGATTAGGCATTCTTGCTCCAGAGGTTCTTCATGGGAACTTTGAAGAAAAAGATTCGTGTAAAAAGATTTTAGAGAAGGCTGGGCTGACAGATTATCAGATAGGGAAAACAAAAATATTCCTAAGAGCTGGTCATATGGCAGAATTGGATGCTCGGAGAGCATACATGCTTAGCAATTCTGCAACAACTATCCAAAAGCAGACTAAAACTCATTTTAGTCGGAAATCATATATTACACTGCGAAAGTCCTCTATCTTTATGCAATCTATTTGCAGAGGAGATCTGGCACGGAGAAAATACTACCACATGAAGAGGGAAGTAGCTGCAATCAAAATTCAAGCATATACGCGCAGAAGATTAGCCAGAAAAAGCTACACTGAAATAAGGATTTCTGCCATTGTCCTGCAGACAGGTTTTCTGGTAATGGCTGCTCATGATAAATTGAGATATAGAAAGCAAACTAGTGCATCAACTAGAATTCAGTCCTATTGGCGGCGACATAAAGCTCTCTCTGACTATCAGAACCTTAAGAAAGCGTCAATCATTTCTCGAAGTGCCGATCAATGTAGTGATGAACATGAACAGAAGGAGGCTGTGGAGATATCAGTGGAAAATAAAAGTCCTTCTGTAGAAGAATCTTCAAATGTATTCCACGAAGAATCTTCAAATGTATTCCACGAAGAATCCTCAAGTTCTTTACAAGATAATGAAAGCATTGAAGCTATTAGGGATTGCTCTAGTCCTCTCGAAGACACCGAAAAGATTGAGGCTCTTACTGCAGAGATAAAAAATTTAAAGGTCATGTTGCAGAAAGAAAAACAAAAAACTGATGAGTATGAAAGGAAATATGTAGAAGCTCAAGGATCTAGCGAAGAGTTACGCAAAAAGTTAGCCGAAACTGAAAAAAGGGTATATCAGCTTCAGGACTCATTGAACAGGATGATATCTTCCATGTCAACTCAAGTTGCCGAGCTGAAGACGATCTTAAGTACTTCATCAAGATTGAGTTCAACTTTTCGACCTATTGCTAGAGTTGATGTTGCTTCCAGTAACTCTGATACTTCATCTACAGACTCTGATTTCACATTTCCAGCGCCCGTTTCAAATCCAGAAGAATGCTCTTCTACCAAGCCAAAATCTTTTCAACTAGTAGTTCAGGATGTCACTGCAGTGGAAGGATCAGGATCTGAAAGTGAAAAAGAAGTCTCTGAGGAAACAAGGAAGAAAGACAGAGAAAGGGATGGAGGCAGCATTGGATAG 3294 0.391 MGMPENIIVGSHVWVGDPELVWIDGVVLNINGEEVEIQTSNEKKVVSCLSKLHPKDTDAPTDGVDDMTKLAYLHEPGVLHNLETRYKINEIYTYTGNILIAINPFQNLPHLYDANAMKKYKGEKIGNLSPHVFAIAEAAYRAMITEEKSNSILVSGESGAGKTETTKTLMLYLAYLGGHTASEGRTVEQQVLESNPVLEAFGNAKTVRNDNSSRFGKFVEIQFDKIGRISGAAIRTYLLEKSRVCQISDPERNYHCFYLLCASPPEEKEKYKLGDPRSFHYLNQSSCYELTGVNAAQEYLSTKRAMDIVGISQEEQDAIFRVVAAILHLGNVRFAKSEETDSSVLADEDSKFHLQTTAELLMCDPNAVEVALCKRVMITPEEIIERSLDPLAATVSRDGLAKTLYSRLFDWLVQKINISIGQDPTSKYLIGVLDIYGFESFQTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYLEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFSTKLYQTFKDHKRFIKPKLARSDFTIVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSTSKCSFVAELFPPLSEETAKSAKFSSIGSRFKLQLQHLMDALNLTEPHYIRCVKPNSLLKPGIFENMNVIHQLRSGGVLEAVRIKCAGFPTHRTFHEFLTRLGILAPEVLHGNFEEKDSCKKILEKAGLTDYQIGKTKIFLRAGHMAELDARRAYMLSNSATTIQKQTKTHFSRKSYITLRKSSIFMQSICRGDLARRKYYHMKREVAAIKIQAYTRRRLARKSYTEIRISAIVLQTGFLVMAAHDKLRYRKQTSASTRIQSYWRRHKALSDYQNLKKASIISRSADQCSDEHEQKEAVEISVENKSPSVEESSNVFHEESSNVFHEESSSSLQDNESIEAIRDCSSPLEDTEKIEALTAEIKNLKVMLQKEKQKTDEYERKYVEAQGSSEELRKKLAETEKRVYQLQDSLNRMISSMSTQVAELKTILSTSSRLSSTFRPIARVDVASSNSDTSSTDSDFTFPAPVSNPEECSSTKPKSFQLVVQDVTAVEGSGSESEKEVSEETRKKDRERDGGSIG 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00131 1097 Gene3D - 252 310 - -
Car04g00131 1097 Gene3D Kinesin motor domain 65 662 IPR036961 -
Car04g00131 1097 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 MobiDBLite consensus disorder prediction 1026 1097 - -
Car04g00131 1097 Gene3D - 439 623 - -
Car04g00131 1097 CDD MYSc_Myo11 76 720 IPR036018 -
Car04g00131 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 786 859 IPR027417 -
Car04g00131 1097 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 Gene3D - 734 787 - -
Car04g00131 1097 Coils Coil 933 988 - -
Car04g00131 1097 MobiDBLite consensus disorder prediction 884 916 - -
Car04g00131 1097 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 ProSiteProfiles IQ motif profile. 735 762 IPR000048 GO:0005515
Car04g00131 1097 Pfam Myosin N-terminal SH3-like domain 9 45 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Car04g00131 1097 MobiDBLite consensus disorder prediction 879 916 - -
Car04g00131 1097 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car04g00131 1097 PANTHER MYOSIN 6 1024 - -
Car04g00131 1097 MobiDBLite consensus disorder prediction 1075 1097 - -
Car04g00131 1097 ProSiteProfiles IQ motif profile. 783 807 IPR000048 GO:0005515
Car04g00131 1097 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 6 1024 - -
Car04g00131 1097 Pfam IQ calmodulin-binding motif 833 851 IPR000048 GO:0005515
Car04g00131 1097 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Car04g00131 1097 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 785 IPR027417 -
Car04g00131 1097 SMART iq_5 757 779 IPR000048 GO:0005515
Car04g00131 1097 SMART iq_5 734 756 IPR000048 GO:0005515
Car04g00131 1097 SMART iq_5 830 852 IPR000048 GO:0005515
Car04g00131 1097 SMART iq_5 782 804 IPR000048 GO:0005515
Car04g00131 1097 ProSiteProfiles IQ motif profile. 831 858 IPR000048 GO:0005515
Car04g00131 1097 MobiDBLite consensus disorder prediction 1026 1071 - -
Car04g00131 1097 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Car04g00131 1097 Gene3D - 666 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00131 Car-Chr4 1296629 1325394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00131 1 992 Myosins gene family AT1G54560 64.797 0.0 1409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00131 K10357 - gmx:100803485 1795.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00131 04 1296629 1325394 Car04g00131 04 1296629 1325394 ECH