Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00130 ATGGAAGGAAACTATGTGAATAGAAACACTAGTCATCATGAAAACTTGGGTTTTGAAGAGCACTCATGGGGAACTTCATGGCCAGCAAGAAACTATTCTTGTAGCTTTTGCAAAAGAGAGTTTAGGTCAGCTCAAGCTTTAGGTGGACATATGAATGTTCATAGAAGAGATAGGGCAAGATTGAGatcatccttaatatcttcatcatcatcatcatGGAATAATATTTCTGATCAATGCCCTAATAACAATATTAAACCTAACCCTACCAACACTACAACTACTTCTCTTCTTCTTTCATCACCTTCTCCTTTATCTAATGATCTTTTGATGAATTGTTCACATCCTTCATCTTCTTCATCTTCACTTTTTCTCACTTTATCTTCTTCACCTTCATTAGCTCCTAATAATCCCTTTTATGAAAAGAAACCAAGACTCACTACACCTTCTTTATCTCTTCCTCTTTTGAGTCCTCAAAGAAGTGAAATTATGATGATGAGTAAGAGCTCAAGGAGGAGTACTACTACTTTAGGTGTTGAAGAAATGAAGGGCTATGAAAAAGAGGTGAAGATGAACAATGTTTTCATGAATAATGAACAAAACATTACTTTGGAGTTAGGAATAGGCTTGTTTAAACATCAACAAGAAGAGAAGTTAGATTTGGAGCTTCGACTTTAG 678 0.3392 MEGNYVNRNTSHHENLGFEEHSWGTSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRARLRSSLISSSSSSWNNISDQCPNNNIKPNPTNTTTTSLLLSSPSPLSNDLLMNCSHPSSSSSSLFLTLSSSPSLAPNNPFYEKKPRLTTPSLSLPLLSPQRSEIMMMSKSSRRSTTTLGVEEMKGYEKEVKMNNVFMNNEQNITLELGIGLFKHQQEEKLDLELRL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00130 225 PANTHER OS07G0101800 PROTEIN 12 225 - -
Car04g00130 225 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 12 225 - -
Car04g00130 225 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Car04g00130 225 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Car04g00130 225 SMART c2h2final6 32 54 IPR013087 -
Car04g00130 225 Pfam C2H2-type zinc finger 32 56 - -
Car04g00130 225 Gene3D Classic Zinc Finger 13 86 - -
Car04g00130 225 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Car04g00130 225 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00130 Car-Chr4 1292524 1293201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00130 3 225 C2H2 Transcription Factor Family AT3G23130 36.771 3.28e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g00130 zf-C2H2_6 1.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00130 - - mtr:MTR_1g070265 172.94