Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00129 ATGGAATTCAGCTACCTTCAAGAAGATTCTTCCAAGAGCTCAAGCGACGAAAACATCGATCGATCGTCGGAGCGAAACCACGAAGATGATCATGATATTGGAACCGGTAGATCTTATGAGTGTGTGTTTTGCAAAAGAGGTTTCACAACTGCACAAGCTTTAGGAGGACATATGAACATACATAGAAAAGATAGAGCCAATAATAACAAGAGTAATACTACAAAACCCAATTTTACCCCTCATCCTCCTAGTAGTTCAAGCAAATTAGTTGATGATCATAGCTATGCAAATCTTGGATTTTATTCATCAATTCCAAGAGGGGCTTATTATAATTCAATTTCATCAACTACTTCTCCTCAATATCATCATGAAAATCAAAGGGTTTTTGGACAAGATTGGAGCAAGAAGGGTTTGAGCTTATACACTAATCCATTAAATAAAGACAAGATAGAAAACAACAATGAAGTTGATGATTTGGATTTGGAGCTTAGACTTGGTCATTATCCATAG 510 0.3627 MEFSYLQEDSSKSSSDENIDRSSERNHEDDHDIGTGRSYECVFCKRGFTTAQALGGHMNIHRKDRANNNKSNTTKPNFTPHPPSSSSKLVDDHSYANLGFYSSIPRGAYYNSISSTTSPQYHHENQRVFGQDWSKKGLSLYTNPLNKDKIENNNEVDDLDLELRLGHYP 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00129 169 MobiDBLite consensus disorder prediction 1 35 - -
Car04g00129 169 PANTHER OS07G0101800 PROTEIN 7 105 - -
Car04g00129 169 PANTHER OS07G0101800 PROTEIN 125 169 - -
Car04g00129 169 MobiDBLite consensus disorder prediction 55 90 - -
Car04g00129 169 Pfam C2H2-type zinc finger 39 63 - -
Car04g00129 169 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
Car04g00129 169 Gene3D Classic Zinc Finger 8 94 - -
Car04g00129 169 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Car04g00129 169 SUPERFAMILY beta-beta-alpha zinc fingers 37 65 IPR036236 -
Car04g00129 169 MobiDBLite consensus disorder prediction 70 90 - -
Car04g00129 169 MobiDBLite consensus disorder prediction 13 35 - -
Car04g00129 169 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 125 169 - -
Car04g00129 169 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 7 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00129 Car-Chr4 1275697 1276281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00129 37 169 C2H2 Transcription Factor Family AT4G17810 32.667 2.26e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car04g00129 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00129 - - gmx:102670484 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00129 04 1275697 1276281 Car04g00129 04 1275697 1276281 ECH