Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00114 ATGACAGAATCCTTTTCATGGGATGATTTCTTTTTCTTCAATGAAGacaacaacaataacaataacaataagataacCTTTCCTTTGAACTTCAATGACCAAACCTCACAAATCAAAGAATCATCATCTTCATATTCAAATTCCAACACTTCAGGCTCTCAAATAAGCAATGAATCACAAGAAGTTTCTTCCACTTCAACTCACTTACTATCATCATCATCACCTAATGATGAAAGTAAAAGACCATACAGAGGAGTTAGGAGAAGACCATGGGGAAAATTTGCAGCTGAAATAAGAGACTCAACAAGAAATGGTGTTAGAGTTTGGATTGGTACATTTGATACAGCTGAAGCAGCTGCTTTAGCTTATGATCAAGCTGCTTTATCAACAAGAGGGTCAATGGCAGTGTTGAATTTTCCTGAACAAGTTGTGAGGGAATCATTGAAAGATATGATGAATAATAAATCTTGTGAAGATGATCATGATCATGGTTCTTCTCCTGTTTTAGCACTTAAAAGGAAACACACTTTGAAAAGAAAATCTAAGGCAAGTAGTAACAAAAAGACCAAAAGGGATGAAATTCAAAATGTTAATGTTTCACAAAGTGTGTTGGTTTTGGAAGATTTGGGTTCTGAATATCTTGACCAACTTCTTAGCTTGACTTCTTCTTCTCAAATCATTTGCTAG 687 0.3362 MTESFSWDDFFFFNEDNNNNNNNKITFPLNFNDQTSQIKESSSSYSNSNTSGSQISNESQEVSSTSTHLLSSSSPNDESKRPYRGVRRRPWGKFAAEIRDSTRNGVRVWIGTFDTAEAAALAYDQAALSTRGSMAVLNFPEQVVRESLKDMMNNKSCEDDHDHGSSPVLALKRKHTLKRKSKASSNKKTKRDEIQNVNVSQSVLVLEDLGSEYLDQLLSLTSSSQIIC 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00114 228 MobiDBLite consensus disorder prediction 38 85 - -
Car04g00114 228 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Car04g00114 228 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Car04g00114 228 SUPERFAMILY DNA-binding domain 83 141 IPR016177 GO:0003677
Car04g00114 228 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Car04g00114 228 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 221 - -
Car04g00114 228 PANTHER DNA-BINDING DOMAIN 2 221 IPR044808 GO:0003700|GO:0009873
Car04g00114 228 MobiDBLite consensus disorder prediction 174 193 - -
Car04g00114 228 CDD AP2 83 142 IPR001471 GO:0003700|GO:0006355
Car04g00114 228 MobiDBLite consensus disorder prediction 38 79 - -
Car04g00114 228 Pfam AP2 domain 83 132 IPR001471 GO:0003700|GO:0006355
Car04g00114 228 Gene3D AP2/ERF domain 82 142 IPR036955 GO:0003700|GO:0006355
Car04g00114 228 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00114 Car-Chr4 1141383 1143593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00114 56 218 AP2-EREBP Transcription Factor Family AT3G23240 51.829 6.85e-51 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Car04g00114 AP2 9.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00114 K14516 - gmx:100784784 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00114 04 1141383 1143593 Car04g00114 04 1141383 1143593 ECH
Car03g02318 03 69137410 69138367 Car04g00114 04 1141383 1143593 PCT