Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00113 ATGGCCAAGGAGCAAATTCAAGTGCTAAATGCACTAGATGTAGCAAAAACACAATGGTACCATTTCACAGCAATCATAATAGCTGGAATGGGATTTTTCACGGATGCATATGATCTATTCTGCATTTCACTTGTGACAAAGCTTCTTGGTCGTATATATTACCATGTTGATGGAGCTGAAAAGCCAGGGACATTACCACCAAATGTATCAGCAGCAGTGAATGGTGTGGCTTTCATAGGAACACTTTCAGGACAACTCTTTTTCGGTTGGTTAGGGGACAAATTAGGCCGAAAGAAAGTTTATGGAATGACATTGATGGTGATGGTTCTTTGCTCTATAGCTTCTGGTCTTTCATTCGGTCGTGACCCAAAAACTGTATTGGGAACTCTTTGTTTCTTTAGATTCTGGCTTGGTTTTGGTATTGGTGGTGATTATCCACTTTCCGCTACAATTATGTCTGAATACTCAAACAAAAAGACACGTGGTGCTTTTATAGCAGCTGTTTTTGCTATGCAGGGTTTTGGAATTTTAACAGGAGGTATATTTGCAATCTTCATTTCAACTGTGTTTAAGTCACGATTCGATGCACCAGCTTACATGGTTGATCCTTTGGCTTCAACTGTTCCTCAAGCTGATTATGTTTGGAGAATTATCTTAATGTTTGGAGCAATCCCAGCTGCAATGACTTATTACTCAAGGACTAAGATGCCAGAAACAGCGCGTTACACCGCGCTTGTTGCTAAGAATATGGAACAAGCTGCAGCTGATATGTCTAAGGTTATGAACATGGATATTCAAGTTGAGCCTAAAAATGTTGTTGAACAGAAAAAACAATTTGGACTTTTCTCTAAAGAGTTTATGTCACGTCATGGTTTGCATTTACTTGGAACAACATCAACTTGGTTTTTGCTTGATGTTGCATTTTATAGTCAAAATCTTTTCCAAAAAGATATCTTTAGTGCTATTGGTTGGATACCAGCTGCAAAGACAATGAATGCACTTGAAGAGGTTTATAGAATTGCAAGAGCTCAAACACTTATTGCTTTATGCAGTACTGTTCCTGGTTACTGGTTCACAGTGGCATTCATTGATAGAATTGGAAGGTTCACTATTCAATTAATGGGATTCTTCTTCATGACAGTTTTTATGTTTGCACTTGCTATTCCTTATGATTACTGGACACTTAAGGAAAATAGAATTGGTTTTGTGGTGCTTTATTCACTAACATTTTTCTTTGCAAACTTTGGTCCTAATGCAACTACTTTTGTTGTTCCTGCTGAGATTTTCCCAGCTAGATTTAGATCAACTTGTCATGGAATATCATCAGCAGCAGGGAAACTTGGAGCAATGGTTGGTGCATTTGGATTTTTGTATTTGGCACAGAATCAAGATCCTAGTAAAGCTGATGCAGGGTACCCTCCTGGTATTGGTGTCAGGAATTCATTGATTGTGTTAGGTTTTGTTAACATTTTGGGATTCTGCTTTACTTTCTTGGTGCCTGAGGCTAATGGAAAATCCCTTGAAGAGATGTCAGGTGAAGAAATTGAAGAAACTGTTGATACTTCTAATCATAATAACAAAACCAAAATGACGTCACATCCTTAG 1605 0.3807 MAKEQIQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVSAAVNGVAFIGTLSGQLFFGWLGDKLGRKKVYGMTLMVMVLCSIASGLSFGRDPKTVLGTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILTGGIFAIFISTVFKSRFDAPAYMVDPLASTVPQADYVWRIILMFGAIPAAMTYYSRTKMPETARYTALVAKNMEQAAADMSKVMNMDIQVEPKNVVEQKKQFGLFSKEFMSRHGLHLLGTTSTWFLLDVAFYSQNLFQKDIFSAIGWIPAAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDRIGRFTIQLMGFFFMTVFMFALAIPYDYWTLKENRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARFRSTCHGISSAAGKLGAMVGAFGFLYLAQNQDPSKADAGYPPGIGVRNSLIVLGFVNILGFCFTFLVPEANGKSLEEMSGEEIEETVDTSNHNNKTKMTSHP 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00113 534 MobiDBLite consensus disorder prediction 509 534 - -
Car04g00113 534 MobiDBLite consensus disorder prediction 509 523 - -
Car04g00113 534 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Car04g00113 534 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car04g00113 534 Gene3D MFS general substrate transporter like domains 20 528 IPR036259 -
Car04g00113 534 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 1 518 - -
Car04g00113 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 518 - -
Car04g00113 534 CDD MFS_PhT 25 501 - -
Car04g00113 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Car04g00113 534 TIGRFAM 2A0109: phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00113 Car-Chr4 1137736 1140129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00113 1 514 Inorganic Solute Cotransporters AT3G54700 84.047 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00113 K08176 - gmx:100786638 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00113 04 1137736 1140129 Car04g00113 04 1137736 1140129 ECH
Car04g00113 04 1137736 1140129 Car03g02319 03 69155054 69157891 PCT