Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00107 ATGGTTTCTACGGCAACGTGGCTTCGCTACCTTGTTTCCAAAACTCAATTCACCCTCGCCACCGGCTTCAAGAACTATAAAGGAGGTCATCTCAAAGACAATGAGCTATCAGATTTTATCTGGAAGCACTTCCTTCATGGAAAAATGACCTTCTTGCACTGGAATAAAGGAGAGGAGATGGCCCCTACTATTGCTGGAAATGGAGCAACTCTTCTTGTTCGGAGAATACCAATTCCAGACCCAACACATGTTTATGTAGGAGATGTTGTGGTCTTGAAGAACCCTGAAAAGCCAGATGACTACCTAGTCAGAAGATTAGCTGCGACTGAAGGTTATGAAATGGCTTCTACTGATGAAAAGGATGAACCATTTGTTCTTGAGAAAGATCAATGTTGGGTAGTGGCTGAAAATGAAAAATTGAAAGTCAAGGAAGCAATTGATAGTCGAACATTTGGTCCAGTTCACATGACCAACATTGTAGGCAGAGTCCTTTACTGCCTGCGAAGTGCTGTAGACCATGGCCGTGTACAGAACAGTCATTTCAGCATGCGAAAGGATTCACCAGTGTTGGAAGTGGAACTTGATGTTGATGAAATGGCAAAAAGTCACAAAGCCTGA 618 0.4304 MVSTATWLRYLVSKTQFTLATGFKNYKGGHLKDNELSDFIWKHFLHGKMTFLHWNKGEEMAPTIAGNGATLLVRRIPIPDPTHVYVGDVVVLKNPEKPDDYLVRRLAATEGYEMASTDEKDEPFVLEKDQCWVVAENEKLKVKEAIDSRTFGPVHMTNIVGRVLYCLRSAVDHGRVQNSHFSMRKDSPVLEVELDVDEMAKSHKA 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00107 205 SUPERFAMILY LexA/Signal peptidase 57 176 IPR036286 -
Car04g00107 205 Gene3D Umud Fragment, subunit A 39 185 - -
Car04g00107 205 CDD S26_SPase_I 56 163 IPR019533 GO:0004252|GO:0006465
Car04g00107 205 PANTHER OSJNBA0068L06.9 PROTEIN 1 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00107 60 174 MADS-box Gene Family AT1G29960 28.689 8.92e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00107 - - ahf:112738901 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00107 04 1092361 1097609 Car04g00107 04 1092361 1097609 ECH