Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00097 ATGGCGATAGAACAAGAACAAGAGAATGCAAATTCCAATGGAATCAGAGTCCAAGGCATGCAATTCTCATACGACGGACTACAACAACCACCGCTTTTCCTCGATTTCAACCTCCAAGTCTCTCCTGGATCTCGTTGCCTCCTCGTCGGTGCTAACGGATCCGGGAAGACGACTTTGCTGAAGATTCTGGCTGGGAAACATATGGTTGGTGGAAAAGACGTTGTGCGCGTGTTGAATTGTTCAGCTTTTCATGATACTCAACTTGTTTGTAGTGGAGATCTTGCTTATTTGGGTGGATCCTGGAGTAAAAACGTTGGCTCCGCTGGAGACATTCCACTCCAGGGAGACTTCTCTGCTGAACATATGATATTTGGTGTTGAAGGCGTTAATCCTGACAGGAGAGACAAGTTGATTGAGCTGCTTGATATAGATCTGCAGTGGCGAATGCATAAGGTATCTGATGGGCAGCGGCGTCGAGTGCAAATCTGTCTGGGTCTTCTTCATCCGTACAAGGTTCTTTTGCTGGATGAGGTTACAGTCGATCTGGATGTTGTTACTCGAATGGATTTATTGGAATTCTTCAAGGAAGAATGTGAGCAGAGAGAAGCTACAATTGTATATGCCACTCACATTTTTGATGGACTGGAGACATGGGCGACTCATTTGGCATACATACAAGAAGGCGAACTGAGAAGAGCGGAAAAATTGTCAGATGTTAACGAGTTGAAATCTTCAATTAATCTGCTGTCTGTTGTTGAGTCCTGGCTCCGCGCTGAAACAAAGCTTGAAAAGAAGAAACCTGTCCTTAATACATCTCAATCTCAAGGGAATTCTTTTGCAAGCTCTCCATTCTTTGCATCCAGACACATGGCATACTATCGATAA 885 0.4441 MAIEQEQENANSNGIRVQGMQFSYDGLQQPPLFLDFNLQVSPGSRCLLVGANGSGKTTLLKILAGKHMVGGKDVVRVLNCSAFHDTQLVCSGDLAYLGGSWSKNVGSAGDIPLQGDFSAEHMIFGVEGVNPDRRDKLIELLDIDLQWRMHKVSDGQRRRVQICLGLLHPYKVLLLDEVTVDLDVVTRMDLLEFFKEECEQREATIVYATHIFDGLETWATHLAYIQEGELRRAEKLSDVNELKSSINLLSVVESWLRAETKLEKKKPVLNTSQSQGNSFASSPFFASRHMAYYR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00097 294 PANTHER ABC TRANSPORTER I FAMILY MEMBER 21 4 294 - -
Car04g00097 294 Gene3D - 12 267 IPR027417 -
Car04g00097 294 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 252 IPR003439 GO:0005524
Car04g00097 294 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 4 294 - -
Car04g00097 294 Pfam ABC transporter 35 68 IPR003439 GO:0005524
Car04g00097 294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 243 IPR027417 -
Car04g00097 294 SMART AAA_5 42 228 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00097 Car-Chr4 959706 963574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00097 15 206 Calmodulin-binding Proteins AT2G36910 21.675 6.84e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00097 K12608 - gmx:100788503 496.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00097 04 959706 963574 Car04g00097 04 959706 963574 ECH