Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g00096 ATGGATTCTGCAAGGAGTTGGCTTCAGAAGTTGCAGCCTCGTGATAAAATGAAGGCAAAGAAGAACTTTGAGGATGGTAACAATGACGGAAATGGAGATTTGGCAACACCTATGGATGAAGCATCTCTTTCTGATGTCACTAAACAGAAGGTTGCGGCGGCAAAGCAGTATATTGAAAATCATTACAAGGAGCAAATGAAGAATCTTCAGGAGAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTGGCTGACGCAGATGTCTCTGAAGAGGATCAAAACAACCTGCTTAAATTTTTAGAGAAAAAGGAAACCGAATATATGCGCCTTCAGAGGGCCAAGATGGGTGTTGATGATTTTGAGTTATTGACTATGATTGGAAAAGGGGCATTTGGAGAGGTCAGAGTTTGCAGAGAGAAGACTACTGATCATGTATTCGCCATGAAAAAGCTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTTGAACACGTTAAAGCAGAAAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTCCAGGACGATGAGTATCTTTATCTTATTATGGAGTATCTACCGGGTGGAGATATGATGACTCTACTTATGAGAAAGGATACCTTGACTGAAGATGAAGCCAGATTttatgtaggagaaactgttctggctattgaatctatacacaagcacaattatatacatagGGATATCAAGCCTGACAACTTATTACTTGATAGATATGGACACTTGAGACTGTCTGACTTTGGACTTTGTAAACCATTAGATTGTAGTCAGCTTGAAGAAACAGATTTTTCTATGGGTCAGAATGTGAATGGGTCTACACAGAATGAGGAGCGTTCAGCTCCAAAACGCACACAACAAGAACAACTACAAAACTGGCAAAAGAACAGGAGGACACTTGCTTATTCCACAGTTGGTACACCGGATTATATTGCTCCAGAAGTTCTTTTGAAGAAAGGATATGGAATGGAATGTGATTGGTGGTCACTTGGTGCTATCATGTATGAAATGTTGGTGGGATATCCGCCTTTTTATTCTGATGATCCAATGACAACATGTAGGAAGATAGTGAACTGGAAATCTCACTTGAAATTTCCCGAGGAAGCTGGGCTATCGCCACAGGCTAAAGATCTTATTAGTAGACTTTTATGTAATGTCAACCATAGGCTGGGATCAAAAGGTGCACATGAAATAAAGGCTCACCCGTTCTTCAGAGATGTTGAATGGGATAAACTATATCAAATTGATGCTGCATTTATACCTGAGGTCAACGATGAATTAGATACTCAGAATTTTGAAAAGTTTGATGAGGCTGATAGCCAAACTCGACCTTCGTCAAAAACTGGTCCATGGAGGAAGATGCTTTCATCTAAGGACTTGAATTTTGTTGGATACACATACAAGAACTTTGAAATTGTCAACGATTATCAAGTTCCTGGGATGGCTGAACTGAAGAAGAAACCCTCCAAATCAAAGAGACCATCCATTAAGTCACTTTTCGATTCCGATTCAGAGACGTCAGAGGTGTCTGAAGTTTCTGATAAGTCTGCAAGTGATCGACCTGCTCAAGGAAGCTTTTTAAAGCTCTTGCCACCCAAGTTAGATGCATCTCATAGCGAGAGGAATCTCCCTGATAAGTTCTAA 1686 0.3932 MDSARSWLQKLQPRDKMKAKKNFEDGNNDGNGDLATPMDEASLSDVTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRAKMGVDDFELLTMIGKGAFGEVRVCREKTTDHVFAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSQLEETDFSMGQNVNGSTQNEERSAPKRTQQEQLQNWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKSHLKFPEEAGLSPQAKDLISRLLCNVNHRLGSKGAHEIKAHPFFRDVEWDKLYQIDAAFIPEVNDELDTQNFEKFDEADSQTRPSSKTGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKKPSKSKRPSIKSLFDSDSETSEVSEVSDKSASDRPAQGSFLKLLPPKLDASHSERNLPDKF 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g00096 561 MobiDBLite consensus disorder prediction 1 42 - -
Car04g00096 561 Gene3D Phosphorylase Kinase; domain 1 437 450 - -
Car04g00096 561 Coils Coil 62 82 - -
Car04g00096 561 MobiDBLite consensus disorder prediction 500 561 - -
Car04g00096 561 Gene3D Phosphorylase Kinase; domain 1 91 203 - -
Car04g00096 561 ProSiteProfiles Protein kinase domain profile. 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00096 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Car04g00096 561 MobiDBLite consensus disorder prediction 9 27 - -
Car04g00096 561 Gene3D Transferase(Phosphotransferase) domain 1 204 281 - -
Car04g00096 561 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Car04g00096 561 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 38 530 - -
Car04g00096 561 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Car04g00096 561 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car04g00096 561 SMART serkin_6 120 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00096 561 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g00096 561 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car04g00096 561 Gene3D Transferase(Phosphotransferase) domain 1 315 436 - -
Car04g00096 561 CDD STKc_NDR_like 118 482 - -
Car04g00096 561 MobiDBLite consensus disorder prediction 279 302 - -
Car04g00096 561 SUPERFAMILY Protein kinase-like (PK-like) 94 470 IPR011009 -
Car04g00096 561 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g00096 Car-Chr4 946318 957820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g00096 1 516 AGC Kinase Gene Family AT2G20470 79.079 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Car04g00096 Pkinase 4.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car04g00096 K08790 - gmx:100820558 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g00096 04 946318 957820 Car04g00096 04 946318 957820 ECH
Car04g00096 04 946318 957820 Car03g02338 03 69306828 69313573 PCT